* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘pedigreeTools’ ...
** this is package ‘pedigreeTools’ version ‘0.3’
** package ‘pedigreeTools’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (Debian 14.3.0-10) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpRp3Rls/R.INSTALL6ce5c1004570c/pedigreeTools/src'
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c init.c -o init.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c pedigree.c -o pedigree.o
gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o pedigreeTools.so init.o pedigree.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpRp3Rls/R.INSTALL6ce5c1004570c/pedigreeTools/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpRp3Rls/R.INSTALL6ce5c1004570c/pedigreeTools/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpRp3Rls/R.INSTALL6ce5c1004570c/pedigreeTools/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-pedigreeTools/00new/pedigreeTools/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘pedigreeTools’
    finding HTML links ... done
    Dmat                                    html  
    editPed                                 html  
    getA                                    html  
    getAInv                                 html  
    getASelfing                             html  
    getASubset                              html  
    getGenAncestors                         html  
    getT                                    html  
    getTInv                                 html  
    inbreeding                              html  
    ped2DF                                  html  
    pedigree-class                          html  
    pedigree                                html  
    pedigreeTools-package                   html  
    prunePed                                html  
    relfactor                               html  
    relfactorInv                            html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (pedigreeTools)