* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘pamr’ ... ** package ‘pamr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using Fortran compiler: ‘GNU Fortran (Debian 13.2.0-13) 13.2.0’ make[1]: Entering directory '/tmp/RtmpRZ0i08/R.INSTALL2c3a8844bdc214/pamr/src' gfortran-13 -fpic -g -O2 -Wall -mtune=native -c knnimpute.f -o knnimpute.o knnimpute.f:99:72: 99 | 20 pos(k1+1) = pos(k1) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1) knnimpute.f:113:72: 113 | 35 pos(k1+1) = pos(k1) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 35 at (1) knnimpute.f:168:72: 168 | ratio=dabs(dnew-dold)/dold | ^ Warning: ‘dold’ may be used uninitialized [-Wmaybe-uninitialized] knnimpute.f:132:33: 132 | double precision ratio,dold,dnew | ^ note: ‘dold’ was declared here gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o pamr.so knnimpute.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR make[1]: Leaving directory '/tmp/RtmpRZ0i08/R.INSTALL2c3a8844bdc214/pamr/src' make[1]: Entering directory '/tmp/RtmpRZ0i08/R.INSTALL2c3a8844bdc214/pamr/src' make[1]: Leaving directory '/tmp/RtmpRZ0i08/R.INSTALL2c3a8844bdc214/pamr/src' installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-pamr/00new/pamr/libs ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘pamr’ finding HTML links ... done khan html pamr.adaptthresh html pamr.batchadjust html pamr.confusion html pamr.confusion.survival html pamr.cv html pamr.decorrelate html pamr.fdr html pamr.geneplot html pamr.indeterminate html pamr.internal html pamr.listgenes html pamr.makeclasses html pamr.menu html pamr.plotcen html pamr.plotcv html pamr.plotcvprob html pamr.plotfdr html pamr.plotstrata html pamr.plotsurvival html pamr.predict html pamr.predictmany html pamr.surv.to.class2 html pamr.test.errors.surv.compute html pamr.train html ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pamr)