* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘pagoo’ ... ** package ‘pagoo’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘pagoo’ finding HTML links ... done PgR6 html PgR6M html PgR6MS html load_pangenomeRDS html pagoo html panaroo_2_pagoo html roary_2_pagoo html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pagoo)