* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘ordinalTables’ ... ** this is package ‘ordinalTables’ version ‘1.0.0.3’ ** package ‘ordinalTables’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘ordinalTables’ finding HTML links ... done Agresti_bisection html Agresti_compute_lambda html Agresti_compute_pi html Agresti_create_design_matrix html Agresti_equation_1 html Agresti_equation_2 html Agresti_equation_3 html Agresti_extract_delta html Agresti_f html Agresti_kappa_agreement html Agresti_simple_diagonals_parameter_quasi_symmetry html Agresti_starting_values html Agresti_w_diff html Agresti_weighted_tau html Bhapkar_marginal_homogeneity html Bhapkar_quasi_symmetry html Bowker_symmetry html Clayton_marginal_location html Clayton_stratified_marginal_location html Clayton_summarize html Clayton_summarize_stratified html Clayton_two_way_association html Cliff_as_d_matrix html Cliff_compute_d html Cliff_counts_2 html Cliff_counts_3 html Cliff_counts_4 html Cliff_counts_5 html Cliff_counts_6 html Cliff_dependent html Cliff_dependent_compute_cov html Cliff_dependent_compute_cov_from_d html Cliff_dependent_compute_from_matrix html Cliff_dependent_compute_from_table html Cliff_dependent_compute_paired_d html Cliff_independent html Cliff_independent_from_matrix html Cliff_independent_from_table html Cliff_independent_weighted html Cliff_weighted_d_matrix html Goodman_constrained_diagonals_parameter_symmetry html Goodman_diagonals_parameter_symmetry html Goodman_fixed_parameter html Goodman_ml html Goodman_model_i html Goodman_model_i_star html Goodman_model_ii html Goodman_model_ii_star html Goodman_null_association html Goodman_pi html Goodman_pi_matrix html Goodman_symmetric_association_model html Goodman_uniform_association html Ireland_marginal_homogeneity html Ireland_mdis html Ireland_normalize_for_truncation html Ireland_quasi_symmetry html Ireland_quasi_symmetry_model html Ireland_symmetry html McCullagh_compute_Nij html McCullagh_compute_c_plus html McCullagh_compute_condition html McCullagh_compute_cumulative_sums html McCullagh_compute_cumulatives html McCullagh_compute_df html McCullagh_compute_gamma html McCullagh_compute_gamma_from_phi html McCullagh_compute_gamma_plus_1_from_phi html McCullagh_compute_generalized_cumulatives html McCullagh_compute_generalized_pi html McCullagh_compute_lambda html McCullagh_compute_log_l html McCullagh_compute_omega html McCullagh_compute_phi html McCullagh_compute_phi_matrix html McCullagh_compute_pi html McCullagh_compute_pi_from_beta html McCullagh_compute_pi_from_gamma html McCullagh_compute_regression_weights html McCullagh_compute_s_plus html McCullagh_compute_update html McCullagh_compute_z html McCullagh_conditional_symmetry html McCullagh_conditional_symmetry_compute_s html McCullagh_conditional_symmetry_initialize_phi html McCullagh_conditional_symmetry_maximize_phi html McCullagh_conditional_symmetry_maximize_theta html McCullagh_conditional_symmetry_pi html McCullagh_derivative_condition_wrt_psi html McCullagh_derivative_gamma_plus_1_wrt_phi html McCullagh_derivative_gamma_wrt_phi html McCullagh_derivative_gamma_wrt_y html McCullagh_derivative_lagrangian_wrt_delta html McCullagh_derivative_lagrangian_wrt_delta_vec html McCullagh_derivative_lagrangian_wrt_psi html McCullagh_derivative_log_l_wrt_alpha html McCullagh_derivative_log_l_wrt_beta html McCullagh_derivative_log_l_wrt_c html McCullagh_derivative_log_l_wrt_delta html McCullagh_derivative_log_l_wrt_delta_vec html McCullagh_derivative_log_l_wrt_params html McCullagh_derivative_log_l_wrt_phi html McCullagh_derivative_log_l_wrt_psi html McCullagh_derivative_omega_wrt_alpha html McCullagh_derivative_omega_wrt_c html McCullagh_derivative_omega_wrt_delta html McCullagh_derivative_omega_wrt_delta_vec html McCullagh_derivative_omega_wrt_psi html McCullagh_derivative_phi_wrt_gamma html McCullagh_derivative_pi_wrt_alpha html McCullagh_derivative_pi_wrt_c html McCullagh_derivative_pi_wrt_delta html McCullagh_derivative_pi_wrt_delta_vec html McCullagh_derivative_pi_wrt_psi html McCullagh_derivative_pij_wrt_alpha html McCullagh_derivative_pij_wrt_c html McCullagh_derivative_pij_wrt_delta html McCullagh_derivative_pij_wrt_delta_vec html McCullagh_derivative_pij_wrt_psi html McCullagh_extract_weights html McCullagh_fit_location_regression_model html McCullagh_generalized_palindromic_symmetry html McCullagh_generalized_pij_qij html McCullagh_generate_names html McCullagh_get_statistics html McCullagh_gradient_log_l html McCullagh_hessian_log_l html McCullagh_initialize_beta html McCullagh_initialize_delta html McCullagh_initialize_delta_vec html McCullagh_initialize_psi html McCullagh_initialize_x html McCullagh_is_in_constraint_set html McCullagh_is_pi_invalid html McCullagh_log_L html McCullagh_logistic_model html McCullagh_logits html McCullagh_maximize_q_symmetry html McCullagh_newton_raphson_update html McCullagh_palindromic_symmetry html McCullagh_penalized html McCullagh_pij_qij html McCullagh_proportional_hazards html McCullagh_q_symmetry_initialize_alpha html McCullagh_q_symmetry_initialize_phi html McCullagh_q_symmetry_pi html McCullagh_quasi_symmetry html McCullagh_second_order_lagrangian_wrt_psi_2 html McCullagh_second_order_lagrangian_wrt_psi_alpha html McCullagh_second_order_lagrangian_wrt_psi_delta html McCullagh_second_order_lagrangian_wrt_psi_delta_vec html McCullagh_second_order_log_l_wrt_alpha_2 html McCullagh_second_order_log_l_wrt_alpha_c html McCullagh_second_order_log_l_wrt_beta_2 html McCullagh_second_order_log_l_wrt_c_2 html McCullagh_second_order_log_l_wrt_delta_2 html McCullagh_second_order_log_l_wrt_delta_alpha html McCullagh_second_order_log_l_wrt_delta_c html McCullagh_second_order_log_l_wrt_delta_vec_2 html McCullagh_second_order_log_l_wrt_delta_vec_alpha html McCullagh_second_order_log_l_wrt_delta_vec_c html McCullagh_second_order_log_l_wrt_parms html McCullagh_second_order_log_l_wrt_psi_2 html McCullagh_second_order_log_l_wrt_psi_alpha html McCullagh_second_order_log_l_wrt_psi_c html McCullagh_second_order_log_l_wrt_psi_delta html McCullagh_second_order_log_l_wrt_psi_delta_vec html McCullagh_second_order_omega_wrt_alpha_2 html McCullagh_second_order_omega_wrt_alpha_c html McCullagh_second_order_omega_wrt_c_2 html McCullagh_second_order_omega_wrt_delta_2 html McCullagh_second_order_omega_wrt_delta_alpha html McCullagh_second_order_omega_wrt_delta_c html McCullagh_second_order_omega_wrt_delta_vec_2 html McCullagh_second_order_omega_wrt_delta_vec_alpha html McCullagh_second_order_omega_wrt_delta_vec_c html McCullagh_second_order_omega_wrt_psi_2 html McCullagh_second_order_omega_wrt_psi_alpha html McCullagh_second_order_omega_wrt_psi_c html McCullagh_second_order_omega_wrt_psi_delta html McCullagh_second_order_omega_wrt_psi_delta_vec html McCullagh_second_order_pi_wrt_alpha_2 html McCullagh_second_order_pi_wrt_alpha_c html McCullagh_second_order_pi_wrt_c_2 html McCullagh_second_order_pi_wrt_delta_2 html McCullagh_second_order_pi_wrt_delta_alpha html McCullagh_second_order_pi_wrt_delta_c html McCullagh_second_order_pi_wrt_delta_vec_2 html McCullagh_second_order_pi_wrt_delta_vec_alpha html McCullagh_second_order_pi_wrt_delta_vec_c html McCullagh_second_order_pi_wrt_psi_2 html McCullagh_second_order_pi_wrt_psi_alpha html McCullagh_second_order_pi_wrt_psi_c html McCullagh_second_order_pi_wrt_psi_delta html McCullagh_second_order_pi_wrt_psi_delta_vec html McCullagh_update_parameters html McCullagh_v_inverse html Schuster_compute_df html Schuster_compute_pi html Schuster_compute_starting_values html Schuster_derivative_log_l_wrt_kappa html Schuster_derivative_log_l_wrt_marginal_pi html Schuster_derivative_log_l_wrt_v html Schuster_derivative_pi_wrt_kappa html Schuster_derivative_pi_wrt_marginal_pi html Schuster_derivative_pi_wrt_v html Schuster_derivative_v_wrt_v html Schuster_enforce_constraints_on_v html Schuster_gradient html Schuster_hessian html Schuster_is_pi_valid html Schuster_newton_raphson html Schuster_second_deriv_log_l_wrt_kappa_2 html Schuster_second_deriv_log_l_wrt_kappa_v html Schuster_second_deriv_log_l_wrt_marginal_pi_2 html Schuster_second_deriv_log_l_wrt_marginal_pi_kappa html Schuster_second_deriv_log_l_wrt_marginal_pi_v html Schuster_second_deriv_log_l_wrt_v_2 html Schuster_second_deriv_pi_wrt_kappa_2 html Schuster_second_deriv_pi_wrt_kappa_v html Schuster_second_deriv_pi_wrt_marginal_pi_2 html Schuster_second_deriv_pi_wrt_marginal_pi_kappa html Schuster_second_deriv_pi_wrt_marginal_pi_v html Schuster_second_deriv_pi_wrt_v_2 html Schuster_solve_for_v html Schuster_solve_for_v1 html Schuster_symmetric_rater_agreement_model html Schuster_update html Schuster_v_tilde html Stuart_marginal_homogeneity html budget_actual html budget_expected html coal_g html constant_of_integration html depression html dogs html dreams html dumping html esophageal_cancer html expand html expit html family_income html gender_vision html handle_max_i_i html handle_max_i_k html handle_max_k_k2 html handle_one_maximum html handle_tied_below_maximum html handle_tied_maximum html handle_untied_below_maximum html homicide_black_black html homicide_black_white html homicide_white_black html homicide_white_white html hypothalamus_1 html hypothalamus_2 html interference_12 html interference_control_1 html interference_control_2 html is_invertible html is_missing_or_infinite html kappa html likelihood_ratio_chisq html loadRData html log_Linear_create_log_n html log_likelihood html log_linear_add_all_diagonals html log_linear_append_column html log_linear_create_coefficient_names html log_linear_create_linear_by_linear html log_linear_equal_weight_agreement_design html log_linear_fit html log_linear_main_effect_design html log_linear_matrix_to_vector html log_linear_quasi_symmetry_model_design html log_linear_remove_column html log_linear_symmetry_design html logit html mental_health html model_i_column_theta html model_i_effects html model_i_fHat html model_i_normalize_fHat html model_i_row_column_odds_ratios html model_i_row_theta html model_i_star_effects html model_i_star_fHat html model_i_star_update_theta html model_i_starting_values html model_i_update_alpha html model_i_update_beta html model_i_update_delta html model_i_update_gamma html model_i_zeta html model_ii_effects html model_ii_fHat html model_ii_ksi html model_ii_star_effects html model_ii_star_fHat html model_ii_star_update_phi html model_ii_starting_values html model_ii_update_alpha html model_ii_update_beta html model_ii_update_rho html model_ii_update_sigma html movies html new_orleans_data html null_association_fHat html occupational_status html paranoia html pearson_chisq html radiology html social_status html social_status2 html taste html teachers html teaching_style html tonsils html tv html uniform_association_fHat html uniform_association_update_theta html var_kappa html var_weighted_kappa html vision_data html vision_data_men html von_Eye_diagonal html von_Eye_diagonal_linear_by_linear html von_Eye_equal_weight_diagonal_linear html von_Eye_equal_weighted_diagonal html von_Eye_linear_by_linear html von_Eye_main_effect html von_Eye_weight_by_response_category_design html weighted_cov html weighted_kappa html weighted_var html winnipeg_data html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ordinalTables)