* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘ontophylo’ ...
** this is package ‘ontophylo’ version ‘1.1.3’
** package ‘ontophylo’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘ontophylo’
    finding HTML links ... done
    HAO                                     html  
    KDE_unnorm_trunc_Markov                 html  
    KDE_unnormalized_scalar_Markov_kernel   html  
    MultiScale.simmap                       html  
    RAC_query                               html  
    add_noise_MD                            html  
    add_pseudodata                          html  
    anat_plot                               html  
    color.bar                               html  
    derivative_KDE                          html  
    discr_Simmap                            html  
    discr_Simmap_all                        html  
    edge_profiles4plotting                  html  
    edgeplot                                html  
    estimate_band_W                         html  
    estimate_edge_KDE                       html  
    estimate_edge_KDE_Markov_kernel_unnorm
                                            html  
    get_descendants_chars                   html  
    get_path_edges                          html  
    get_rough_state_cols                    html  
    get_state                               html  
    get_states_path                         html  
    get_vector_ids_list                     html  
    get_vector_ids_per_term                 html  
    hym_annot                               html  
    hym_graph                               html  
    hym_hm                                  html  
    hym_img                                 html  
    hym_kde                                 html  
    hym_matrix                              html  
    hym_nhpp                                html  
    hym_stm                                 html  
    hym_stm_amalg                           html  
    hym_stm_mds                             html  
    hym_tree                                html  
    integrate_edge_KDE                      html  
    join_edges                              html  
    list2edges                              html  
    loess_smoothing_KDE                     html  
    make_colors                             html  
    make_colors_relative_scale              html  
    make_contMap_KDE                        html  
    make_data_NHPP_KDE_Markov_kernel        html  
    make_data_NHPP_over_edge_MarkovKDE      html  
    make_pic                                html  
    make_postPois_KDE                       html  
    mds_plot                                html  
    merge_branch_cat                        html  
    merge_tree_cat                          html  
    merge_tree_cat_list                     html  
    normalize_KDE                           html  
    pNHPP                                   html  
    paramo                                  html  
    paramo.list                             html  
    path_hamming                            html  
    path_hamming_over_all_edges             html  
    path_hamming_over_trees_KDE             html  
    posterior_lambda_KDE                    html  
    posterior_lambda_KDE_Distr              html  
    read_Simmap_Rev                         html  
    stack2                                  html  
    stack_stm                               html  
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ontophylo)