* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘oce’ ...
** package ‘oce’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-13) 13.2.0’
using Fortran compiler: ‘GNU Fortran (Debian 13.2.0-13) 13.2.0’
using C++ compiler: ‘g++-13 (Debian 13.2.0-13) 13.2.0’
make[1]: Entering directory '/tmp/RtmpPWi3sl/R.INSTALL27eb34449eca64/oce/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c ad2cp_ahrs.cpp -o ad2cp_ahrs.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c adv_vector_time.cpp -o adv_vector_time.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c amsr.cpp -o amsr.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c approx.cpp -o approx.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c bilinear_interp.cpp -o bilinear_interp.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c binmap.c -o binmap.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c bitwise.c -o bitwise.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c coastline.c -o coastline.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c curl.cpp -o curl.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c echosounder.cpp -o echosounder.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c fillgap.cpp -o fillgap.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c gappy_index.cpp -o gappy_index.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c geod.cpp -o geod.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c get_bit.cpp -o get_bit.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c gradient.cpp -o gradient.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c igrf12.f -o igrf12.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c igrf13.f -o igrf13.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c interp_barnes.cpp -o interp_barnes.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c landsat.cpp -o landsat.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c ldc_ad2cp_in_file.cpp -o ldc_ad2cp_in_file.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c ldc_rdi_in_buffer.c -o ldc_rdi_in_buffer.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c ldc_rdi_in_file.cpp -o ldc_rdi_in_file.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c magdec.f -o magdec.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c map.c -o map.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c matrix_smooth.cpp -o matrix_smooth.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c oce_approx.cpp -o oce_approx.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c oce_convolve.cpp -o oce_convolve.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c oce_filter.cpp -o oce_filter.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c ocecp.f -o ocecp.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c registerDynamicSymbol.c -o registerDynamicSymbol.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c run.cpp -o run.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c sfm_enu.cpp -o sfm_enu.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c sontek_adp.cpp -o sontek_adp.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c sw.c -o sw.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c time.cpp -o time.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c trap.cpp -o trap.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c trim.cpp -o trim.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o oce.so RcppExports.o ad2cp_ahrs.o adv_vector_time.o amsr.o approx.o bilinear_interp.o binmap.o bitwise.o coastline.o curl.o echosounder.o fillgap.o gappy_index.o geod.o get_bit.o gradient.o igrf12.o igrf13.o interp_barnes.o landsat.o ldc_ad2cp_in_file.o ldc_rdi_in_buffer.o ldc_rdi_in_file.o magdec.o map.o matrix_smooth.o oce_approx.o oce_convolve.o oce_filter.o ocecp.o registerDynamicSymbol.o run.o sfm_enu.o sontek_adp.o sw.o time.o trap.o trim.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpPWi3sl/R.INSTALL27eb34449eca64/oce/src'
make[1]: Entering directory '/tmp/RtmpPWi3sl/R.INSTALL27eb34449eca64/oce/src'
make[1]: Leaving directory '/tmp/RtmpPWi3sl/R.INSTALL27eb34449eca64/oce/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-oce/00new/oce/libs
** R
** data
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘oce’
    finding HTML links ... done
    CTD_BCD2014666_008_1_DN.ODF.gz          html  
    GMTOffsetFromTz                         html  
    ODF2oce                                 html  
    ODFListFromHeader                       html  
    ODFNames2oceNames                       html  
    T68fromT90                              html  
    T90fromT48                              html  
    T90fromT68                              html  
    abbreviateTimeLabels                    html  
    ad2cpCodeToName                         html  
    ad2cpHeaderValue                        html  
    addSpine                                html  
    adp-class                               html  
    adp                                     html  
    adpAd2cpFileTrim                        html  
    adpConvertRawToNumeric                  html  
    adpEnsembleAverage                      html  
    adpFlagPastBoundary                     html  
    adpRdiFileTrim                          html  
    adp_rdi.000                             html  
    adv-class                               html  
    adv                                     html  
    advSontekAdrFileTrim                    html  
    airRho                                  html  
    amsr-class                              html  
    amsr                                    html  
    angle2hms                               html  
    angleRemap                              html  
    applyMagneticDeclination-adp-method     html  
    applyMagneticDeclination-adv-method     html  
    applyMagneticDeclination-cm-method      html  
    applyMagneticDeclination-oce-method     html  
    applyMagneticDeclination                html  
    approx3d                                html  
    argShow                                 html  
    argo-class                              html  
    argo                                    html  
    argoGrid                                html  
    argoJuldToTime                          html  
    argoNames2oceNames                      html  
    as.adp                                  html  
    as.argo                                 html  
    as.cm                                   html  
    as.coastline                            html  
    as.ctd                                  html  
    as.echosounder                          html  
    as.gps                                  html  
    as.ladp                                 html  
    as.lisst                                html  
    as.lobo                                 html  
    as.met                                  html  
    as.oce                                  html  
    as.rsk                                  html  
    as.sealevel                             html  
    as.section                              html  
    as.tidem                                html  
    as.topo                                 html  
    as.unit                                 html  
    as.windrose                             html  
    as.xbt                                  html  
    bcdToInteger                            html  
    beamName                                html  
    beamToXyz                               html  
    beamToXyzAdp                            html  
    beamToXyzAdpAD2CP                       html  
    beamToXyzAdv                            html  
    beamUnspreadAdp                         html  
    bilinearInterp                          html  
    binApply1D                              html  
    binApply2D                              html  
    binAverage                              html  
    binCount1D                              html  
    binCount2D                              html  
    binMean1D                               html  
    binMean2D                               html  
    binmapAdp                               html  
    bound125                                html  
    bremen-class                            html  
    byteToBinary                            html  
    cm-class                                html  
    cm                                      html  
    cnvName2oceName                         html  
    coastline-class                         html  
    coastlineBest                           html  
    coastlineCut                            html  
    coastlineWorld                          html  
    colormap                                html  
    colormapGMT                             html  
    composite-amsr-method                   html  
    composite-list-method                   html  
    composite                               html  
    computableWaterProperties               html  
    concatenate-adp-method                  html  
    concatenate-list-method                 html  
    concatenate-oce-method                  html  
    concatenate                             html  
    coriolis                                html  
    ctd-class                               html  
    ctd                                     html  
    ctd.cnv.gz                              html  
    ctdDecimate                             html  
    ctdFindProfiles                         html  
    ctdFindProfilesRBR                      html  
    ctdRaw                                  html  
    ctdRepair                               html  
    ctdTrim                                 html  
    ctd_aml.csv.gz                          html  
    ctimeToSeconds                          html  
    curl                                    html  
    d200321-001.ctd.gz                      html  
    d201211_0011.cnv.gz                     html  
    dataLabel                               html  
    decimate                                html  
    decodeHeaderNortek                      html  
    decodeTime                              html  
    defaultFlags                            html  
    despike                                 html  
    detrend                                 html  
    download.amsr                           html  
    download.coastline                      html  
    download.met                            html  
    download.topo                           html  
    drawDirectionField                      html  
    drawIsopycnals                          html  
    drawPalette                             html  
    echosounder-class                       html  
    echosounder                             html  
    eclipticalToEquatorial                  html  
    enuToOther                              html  
    enuToOtherAdp                           html  
    enuToOtherAdv                           html  
    equatorialToLocalHorizontal             html  
    errorbars                               html  
    fillGap                                 html  
    findBottom                              html  
    firstFinite                             html  
    formatCI                                html  
    formatPosition                          html  
    fullFilename                            html  
    g1sst-class                             html  
    gappyIndex                              html  
    geodDist                                html  
    geodGc                                  html  
    geodXy                                  html  
    geodXyInverse                           html  
    gps-class                               html  
    grad                                    html  
    gravity                                 html  
    handleFlags-adp-method                  html  
    handleFlags-argo-method                 html  
    handleFlags-ctd-method                  html  
    handleFlags-oce-method                  html  
    handleFlags-section-method              html  
    handleFlags-vector-method               html  
    handleFlags                             html  
    handleFlagsInternal                     html  
    head.oce                                html  
    imagep                                  html  
    initialize-ctd-method                   html  
    initializeFlagScheme-ctd-method         html  
    initializeFlagScheme-oce-method         html  
    initializeFlagScheme-section-method     html  
    initializeFlagScheme                    html  
    initializeFlagSchemeInternal            html  
    initializeFlags-adp-method              html  
    initializeFlags-oce-method              html  
    initializeFlags                         html  
    initializeFlagsInternal                 html  
    integerToAscii                          html  
    integrateTrapezoid                      html  
    interpBarnes                            html  
    is.ad2cp                                html  
    julianCenturyAnomaly                    html  
    julianDay                               html  
    labelWithUnit                           html  
    ladp-class                              html  
    landsat-class                           html  
    landsat                                 html  
    landsatAdd                              html  
    landsatTrim                             html  
    latFormat                               html  
    latlonFormat                            html  
    lisst-class                             html  
    lisst                                   html  
    lobo-class                              html  
    lobo                                    html  
    locationForGsw                          html  
    lon360                                  html  
    lonFormat                               html  
    longitudeTighten                        html  
    lonlat2map                              html  
    lonlat2utm                              html  
    lookWithin                              html  
    lowpass                                 html  
    magneticField                           html  
    makeFilter                              html  
    map2lonlat                              html  
    mapArrows                               html  
    mapAxis                                 html  
    mapContour                              html  
    mapCoordinateSystem                     html  
    mapDirectionField                       html  
    mapGrid                                 html  
    mapImage                                html  
    mapLines                                html  
    mapLocator                              html  
    mapLongitudeLatitudeXY                  html  
    mapPlot                                 html  
    mapPoints                               html  
    mapPolygon                              html  
    mapScalebar                             html  
    mapText                                 html  
    mapTissot                               html  
    matchBytes                              html  
    matrixShiftLongitude                    html  
    matrixSmooth                            html  
    met-class                               html  
    met                                     html  
    metNames2oceNames                       html  
    moonAngle                               html  
    numberAsHMS                             html  
    numberAsPOSIXct                         html  
    oce-class                               html  
    oce-deprecated                          html  
    oce                                     html  
    oce.as.raw                              html  
    oce.axis.POSIXct                        html  
    oce.contour                             html  
    oce.grid                                html  
    oce.plot.ts                             html  
    oce.write.table                         html  
    oceApprox                               html  
    oceAxis                                 html  
    oceCRS                                  html  
    oceColors9B                             html  
    oceColorsCDOM                           html  
    oceColorsChlorophyll                    html  
    oceColorsClosure                        html  
    oceColorsDensity                        html  
    oceColorsFreesurface                    html  
    oceColorsGebco                          html  
    oceColorsJet                            html  
    oceColorsOxygen                         html  
    oceColorsPAR                            html  
    oceColorsPalette                        html  
    oceColorsPhase                          html  
    oceColorsSalinity                       html  
    oceColorsTemperature                    html  
    oceColorsTurbidity                      html  
    oceColorsTurbo                          html  
    oceColorsTwo                            html  
    oceColorsVelocity                       html  
    oceColorsViridis                        html  
    oceColorsVorticity                      html  
    oceConvolve                             html  
    oceDebug                                html  
    oceDeleteData                           html  
    oceDeleteMetadata                       html  
    oceEdit                                 html  
    oceFileTrim                             html  
    oceFilter                               html  
    oceGetData                              html  
    oceGetMetadata                          html  
    oceMagic                                html  
    oceNames2whpNames                       html  
    ocePmatch                               html  
    oceProject                              html  
    oceRenameData                           html  
    oceRenameMetadata                       html  
    oceSetData                              html  
    oceSetMetadata                          html  
    oceSmooth                               html  
    oceSpectrum                             html  
    oceUnits2whpUnits                       html  
    ocecolors                               html  
    odf-class                               html  
    parseLatLon                             html  
    plot-adp-method                         html  
    plot-adv-method                         html  
    plot-amsr-method                        html  
    plot-argo-method                        html  
    plot-bremen-method                      html  
    plot-cm-method                          html  
    plot-coastline-method                   html  
    plot-ctd-method                         html  
    plot-echosounder-method                 html  
    plot-gps-method                         html  
    plot-ladp-method                        html  
    plot-landsat-method                     html  
    plot-lisst-method                       html  
    plot-lobo-method                        html  
    plot-met-method                         html  
    plot-oce-method                         html  
    plot-odf-method                         html  
    plot-rsk-method                         html  
    plot-satellite-method                   html  
    plot-sealevel-method                    html  
    plot-section-method                     html  
    plot-tidem-method                       html  
    plot-topo-method                        html  
    plot-windrose-method                    html  
    plot-xbt-method                         html  
    plotInset                               html  
    plotPolar                               html  
    plotProfile                             html  
    plotScan                                html  
    plotSticks                              html  
    plotTS                                  html  
    plotTaylor                              html  
    predict.tidem                           html  
    preferAdjusted                          html  
    presentTime                             html  
    prettyPosition                          html  
    processingLog-set                       html  
    processingLogAppend                     html  
    processingLogItem                       html  
    processingLogShow                       html  
    pwelch                                  html  
    rangeExtended                           html  
    rangeLimit                              html  
    read.adp                                html  
    read.adp.ad2cp                          html  
    read.adp.nortek                         html  
    read.adp.rdi                            html  
    read.adp.sontek                         html  
    read.adp.sontek.serial                  html  
    read.adv                                html  
    read.adv.nortek                         html  
    read.adv.sontek.adr                     html  
    read.adv.sontek.serial                  html  
    read.adv.sontek.text                    html  
    read.amsr                               html  
    read.aquadopp                           html  
    read.aquadoppHR                         html  
    read.aquadoppProfiler                   html  
    read.argo                               html  
    read.argo.copernicus                    html  
    read.bremen                             html  
    read.cm                                 html  
    read.coastline                          html  
    read.coastline.openstreetmap            html  
    read.coastline.shapefile                html  
    read.ctd                                html  
    read.ctd.aml                            html  
    read.ctd.itp                            html  
    read.ctd.odf                            html  
    read.ctd.odv                            html  
    read.ctd.saiv                           html  
    read.ctd.sbe                            html  
    read.ctd.ssda                           html  
    read.ctd.woce                           html  
    read.ctd.woce.other                     html  
    read.echosounder                        html  
    read.g1sst                              html  
    read.gps                                html  
    read.index                              html  
    read.landsat                            html  
    read.lisst                              html  
    read.lobo                               html  
    read.met                                html  
    read.netcdf                             html  
    read.oce                                html  
    read.odf                                html  
    read.rsk                                html  
    read.sealevel                           html  
    read.section                            html  
    read.topo                               html  
    read.woa                                html  
    read.xbt                                html  
    read.xbt.edf                            html  
    read.xbt.noaa1                          html  
    rescale                                 html  
    resizableLabel                          html  
    retime                                  html  
    rotateAboutZ                            html  
    rsk-class                               html  
    rsk                                     html  
    rsk2ctd                                 html  
    rskPatm                                 html  
    rskToc                                  html  
    runlm                                   html  
    satellite-class                         html  
    sealevel-class                          html  
    sealevel                                html  
    sealevelTuktoyaktuk                     html  
    secondsToCtime                          html  
    section-class                           html  
    section                                 html  
    sectionAddStation                       html  
    sectionGrid                             html  
    sectionSmooth                           html  
    sectionSort                             html  
    setFlags-adp-method                     html  
    setFlags-ctd-method                     html  
    setFlags-oce-method                     html  
    setFlags                                html  
    shiftLongitude                          html  
    showMetadataItem                        html  
    siderealTime                            html  
    snakeToCamel                            html  
    standardDepths                          html  
    standardizeLongitude                    html  
    sub-sub-adp-method                      html  
    sub-sub-adv-method                      html  
    sub-sub-amsr-method                     html  
    sub-sub-argo-method                     html  
    sub-sub-bremen-method                   html  
    sub-sub-cm-method                       html  
    sub-sub-coastline-method                html  
    sub-sub-ctd-method                      html  
    sub-sub-echosounder-method              html  
    sub-sub-g1sst-method                    html  
    sub-sub-gps-method                      html  
    sub-sub-ladp-method                     html  
    sub-sub-landsat-method                  html  
    sub-sub-lisst-method                    html  
    sub-sub-lobo-method                     html  
    sub-sub-met-method                      html  
    sub-sub-oce-method                      html  
    sub-sub-odf-method                      html  
    sub-sub-rsk-method                      html  
    sub-sub-sealevel-method                 html  
    sub-sub-section-method                  html  
    sub-sub-tidem-method                    html  
    sub-sub-topo-method                     html  
    sub-sub-windrose-method                 html  
    sub-sub-xbt-method                      html  
    sub-subset-adp-method                   html  
    sub-subset-adv-method                   html  
    sub-subset-amsr-method                  html  
    sub-subset-argo-method                  html  
    sub-subset-bremen-method                html  
    sub-subset-cm-method                    html  
    sub-subset-coastline-method             html  
    sub-subset-ctd-method                   html  
    sub-subset-echosounder-method           html  
    sub-subset-g1sst-method                 html  
    sub-subset-gps-method                   html  
    sub-subset-ladp-method                  html  
    sub-subset-landsat-method               html  
    sub-subset-lisst-method                 html  
    sub-subset-lobo-method                  html  
    sub-subset-met-method                   html  
    sub-subset-oce-method                   html  
    sub-subset-odf-method                   html  
    sub-subset-rsk-method                   html  
    sub-subset-sealevel-method              html  
    sub-subset-section-method               html  
    sub-subset-tidem-method                 html  
    sub-subset-topo-method                  html  
    sub-subset-windrose-method              html  
    sub-subset-xbt-method                   html  
    subset-adp-method                       html  
    subset-adv-method                       html  
    subset-amsr-method                      html  
    subset-argo-method                      html  
    subset-cm-method                        html  
    subset-coastline-method                 html  
    subset-ctd-method                       html  
    subset-echosounder-method               html  
    subset-lobo-method                      html  
    subset-met-method                       html  
    subset-oce-method                       html  
    subset-odf-method                       html  
    subset-rsk-method                       html  
    subset-sealevel-method                  html  
    subset-section-method                   html  
    subset-topo-method                      html  
    subset-xbt-method                       html  
    subtractBottomVelocity                  html  
    summary-adp-method                      html  
    summary-adv-method                      html  
    summary-amsr-method                     html  
    summary-argo-method                     html  
    summary-bremen-method                   html  
    summary-cm-method                       html  
    summary-coastline-method                html  
    summary-ctd-method                      html  
    summary-echosounder-method              html  
    summary-gps-method                      html  
    summary-ladp-method                     html  
    summary-landsat-method                  html  
    summary-lisst-method                    html  
    summary-lobo-method                     html  
    summary-met-method                      html  
    summary-oce-method                      html  
    summary-odf-method                      html  
    summary-rsk-method                      html  
    summary-satellite-method                html  
    summary-sealevel-method                 html  
    summary-section-method                  html  
    summary-tidem-method                    html  
    summary-topo-method                     html  
    summary-windrose-method                 html  
    summary-xbt-method                      html  
    sunAngle                                html  
    sunDeclinationRightAscension            html  
    swAbsoluteSalinity                      html  
    swAlpha                                 html  
    swAlphaOverBeta                         html  
    swBeta                                  html  
    swCSTp                                  html  
    finding level-2 HTML links ... done

    swConservativeTemperature               html  
    swDepth                                 html  
    swDynamicHeight                         html  
    swLapseRate                             html  
    swN2                                    html  
    swPressure                              html  
    swRho                                   html  
    swRrho                                  html  
    swSCTp                                  html  
    swSR                                    html  
    swSTrho                                 html  
    swSigma                                 html  
    swSigma0                                html  
    swSigma1                                html  
    swSigma2                                html  
    swSigma3                                html  
    swSigma4                                html  
    swSigmaT                                html  
    swSigmaTheta                            html  
    swSoundAbsorption                       html  
    swSoundSpeed                            html  
    swSpecificHeat                          html  
    swSpice                                 html  
    swSstar                                 html  
    swTFreeze                               html  
    swTSrho                                 html  
    swThermalConductivity                   html  
    swTheta                                 html  
    swViscosity                             html  
    swZ                                     html  
    tail.oce                                html  
    threenum                                html  
    tidalCurrent                            html  
    tidedata                                html  
    tidem-class                             html  
    tidem                                   html  
    tidemAstron                             html  
    tidemConstituentNameFix                 html  
    tidemVuf                                html  
    timeToArgoJuld                          html  
    titleCase                               html  
    toEnu                                   html  
    toEnuAdp                                html  
    toEnuAdv                                html  
    topo-class                              html  
    topoInterpolate                         html  
    topoWorld                               html  
    unabbreviateYear                        html  
    undriftTime                             html  
    unduplicateNames                        html  
    ungrid                                  html  
    unitFromString                          html  
    unitFromStringRsk                       html  
    unwrapAngle                             html  
    useHeading                              html  
    usrLonLat                               html  
    utm2lonlat                              html  
    vectorShow                              html  
    velocityStatistics                      html  
    webtide                                 html  
    wind                                    html  
    window.oce                              html  
    windrose-class                          html  
    woceNames2oceNames                      html  
    woceUnit2oceUnit                        html  
    write.ctd                               html  
    xbt-class                               html  
    xbt                                     html  
    xbt.edf                                 html  
    xyzToEnu                                html  
    xyzToEnuAdp                             html  
    xyzToEnuAdpAD2CP                        html  
    xyzToEnuAdv                             html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (oce)