* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘networkR’ ...
** this is package ‘networkR’ version ‘0.1.5’
** package ‘networkR’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.3.0-8) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpFRoK0k/R.INSTALL302d7336f7b5fd/networkR/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -DARMA_USE_CURRENT -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -DARMA_USE_CURRENT -fpic  -g -O2 -Wall -pedantic -mtune=native   -c cluster_fam.cpp -o cluster_fam.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -DARMA_USE_CURRENT -fpic  -g -O2 -Wall -pedantic -mtune=native   -c cluster_parental_chains.cpp -o cluster_parental_chains.o
cluster_parental_chains.cpp: In function ‘Rcpp::IntegerVector make_parental_chain(const Rcpp::NumericVector&, const Rcpp::NumericVector&, const Rcpp::NumericVector&)’:
cluster_parental_chains.cpp:75:26: warning: comparison of integer expressions of different signedness: ‘Rcpp::traits::storage_type<13>::type’ {aka ‘int’} and ‘unsigned int’ [-Wsign-compare]
   75 |           if (fatherid[j]<N+1 && motherid[j]<N+1) {
cluster_parental_chains.cpp:75:45: warning: comparison of integer expressions of different signedness: ‘Rcpp::traits::storage_type<13>::type’ {aka ‘int’} and ‘unsigned int’ [-Wsign-compare]
   75 |           if (fatherid[j]<N+1 && motherid[j]<N+1) {
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o networkR.so RcppExports.o cluster_fam.o cluster_parental_chains.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpFRoK0k/R.INSTALL302d7336f7b5fd/networkR/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpFRoK0k/R.INSTALL302d7336f7b5fd/networkR/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpFRoK0k/R.INSTALL302d7336f7b5fd/networkR/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-networkR/00new/networkR/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘networkR’
    finding HTML links ... done
    adjacency                               html  
    hits                                    html  
    make_family_id                          html  
    make_parental_chain                     html  
    mksib                                   html  
    networkR-package                        html  
    validate_trio_consistency               html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (networkR)