* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘networkABC’ ...
** package ‘networkABC’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-13) 13.2.0’
make[1]: Entering directory '/tmp/Rtmp0ZgziK/R.INSTALL23a8361e7a543a/networkABC/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c R_init_networkABC.c -o R_init_networkABC.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c abc_R.c -o abc_R.o
abc_R.c: In function ‘label_non_hubs’:
abc_R.c:554:46: warning: ‘position’ may be used uninitialized [-Wmaybe-uninitialized]
  554 |                         if(graph->edges[nodes[position]][nodes[j]]!=0 || graph->edges[nodes[j]][nodes[position]]!=0) {
      |                                              ^
abc_R.c:521:19: note: ‘position’ was declared here
  521 |         int i, j, position;             //num_connections, removed definition due to warning: unused variable 'num_connections' [-Wunused-variable]
      |                   ^~~~~~~~
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c graph.c -o graph.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c motif.c -o motif.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c network_random_R.c -o network_random_R.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c pool.c -o pool.o
pool.c: In function ‘createMotif’:
pool.c:46:16: warning: ‘graph’ may be used uninitialized [-Wmaybe-uninitialized]
   46 |         return graph;
      |                ^~~~~
pool.c:23:17: note: ‘graph’ was declared here
   23 |          Graph *graph;
      |                 ^~~~~
pool.c: In function ‘createPool’:
pool.c:96:25: warning: ‘graph’ may be used uninitialized [-Wmaybe-uninitialized]
   96 |                 if(graph->clustering_coefficient<CM && graph->number_of_vertices>2) {
      |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
pool.c:63:16: note: ‘graph’ was declared here
   63 |         Graph *graph;
      |                ^~~~~
pool.c: In function ‘createPoolof3Motifs’:
pool.c:160:25: warning: ‘graph’ may be used uninitialized [-Wmaybe-uninitialized]
  160 |                 if(graph->clustering_coefficient<CM && graph->number_of_vertices>2) {
      |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
pool.c:119:16: note: ‘graph’ was declared here
  119 |         Graph *graph;
      |                ^~~~~
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c utils.c -o utils.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o networkABC.so R_init_networkABC.o abc_R.o graph.o motif.o network_random_R.o pool.o utils.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmp0ZgziK/R.INSTALL23a8361e7a543a/networkABC/src'
make[1]: Entering directory '/tmp/Rtmp0ZgziK/R.INSTALL23a8361e7a543a/networkABC/src'
make[1]: Leaving directory '/tmp/Rtmp0ZgziK/R.INSTALL23a8361e7a543a/networkABC/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-networkABC/00new/networkABC/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘networkABC’
    finding HTML links ... done
    abc                                     html  
    clusteringCoefficient                   html  
    localClusteringCoefficient              html  
    netsimul                                html  
    networkABC                              html  
    network_gen                             html  
    resabc                                  html  
    showHp                                  html  
    showNetwork                             html  
    showNp                                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (networkABC)