* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘networkABC’ ...
** this is package ‘networkABC’ version ‘0.9-1’
** package ‘networkABC’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (Debian 14.3.0-8) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpoxfMrg/R.INSTALL19d2c84ddeafc9/networkABC/src'
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c R_init_networkABC.c -o R_init_networkABC.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c abc_R.c -o abc_R.o
abc_R.c: In function ‘label_non_hubs’:
abc_R.c:566:46: warning: ‘position’ may be used uninitialized [-Wmaybe-uninitialized]
566 | if(graph->edges[nodes[position]][nodes[j]]!=0 || graph->edges[nodes[j]][nodes[position]]!=0) {
| ^
abc_R.c:533:19: note: ‘position’ was declared here
533 | int i, j, position; //num_connections, removed definition due to warning: unused variable 'num_connections' [-Wunused-variable]
| ^~~~~~~~
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c alloc2d.c -o alloc2d.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c graph.c -o graph.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c motif.c -o motif.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c network_random_R.c -o network_random_R.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pool.c -o pool.o
pool.c: In function ‘createMotif’:
pool.c:46:16: warning: ‘graph’ may be used uninitialized [-Wmaybe-uninitialized]
46 | return graph;
| ^~~~~
pool.c:23:17: note: ‘graph’ was declared here
23 | Graph *graph;
| ^~~~~
pool.c: In function ‘createPool’:
pool.c:96:25: warning: ‘graph’ may be used uninitialized [-Wmaybe-uninitialized]
96 | if(graph->clustering_coefficient<CM && graph->number_of_vertices>2) {
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
pool.c:63:16: note: ‘graph’ was declared here
63 | Graph *graph;
| ^~~~~
pool.c: In function ‘createPoolof3Motifs’:
pool.c:160:25: warning: ‘graph’ may be used uninitialized [-Wmaybe-uninitialized]
160 | if(graph->clustering_coefficient<CM && graph->number_of_vertices>2) {
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
pool.c:119:16: note: ‘graph’ was declared here
119 | Graph *graph;
| ^~~~~
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utils.c -o utils.o
gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o networkABC.so R_init_networkABC.o abc_R.o alloc2d.o graph.o motif.o network_random_R.o pool.o utils.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpoxfMrg/R.INSTALL19d2c84ddeafc9/networkABC/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpoxfMrg/R.INSTALL19d2c84ddeafc9/networkABC/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpoxfMrg/R.INSTALL19d2c84ddeafc9/networkABC/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-networkABC/00new/networkABC/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘networkABC’
finding HTML links ... done
abc html
clusteringCoefficient html
localClusteringCoefficient html
netsimul html
networkABC-package html
network_gen html
resabc html
showHp html
showNetwork html
showNp html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (networkABC)