* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘netdiffuseR’ ...
** package ‘netdiffuseR’ successfully unpacked and MD5 sums checked
** using staged installation
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether g++-13 -std=gnu++17 accepts -g... yes
checking how to run the C++ preprocessor... g++-13 -std=gnu++17 -E
checking for g++-13 -std=gnu++17 option to support OpenMP... -fopenmp
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-13) 13.2.0’
make[1]: Entering directory '/tmp/Rtmpl5Zgxl/R.INSTALL3906e15d11790e/netdiffuseR/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c adjmat.cpp -o adjmat.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c infection.cpp -o infection.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c netdiffuser_extra.cpp -o netdiffuser_extra.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c plot.cpp -o plot.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c rgraph.cpp -o rgraph.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c stats.cpp -o stats.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c struct_test.cpp -o struct_test.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o netdiffuseR.so RcppExports.o adjmat.o infection.o netdiffuser_extra.o plot.o rgraph.o stats.o struct_test.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -fopenmp -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmpl5Zgxl/R.INSTALL3906e15d11790e/netdiffuseR/src'
make[1]: Entering directory '/tmp/Rtmpl5Zgxl/R.INSTALL3906e15d11790e/netdiffuseR/src'
make[1]: Leaving directory '/tmp/Rtmpl5Zgxl/R.INSTALL3906e15d11790e/netdiffuseR/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-netdiffuseR/00new/netdiffuseR/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘netdiffuseR’
finding HTML links ... done
approx_geodesic html
as.array.diffnet html
as_dgCMatrix html
bass html
bootnet html
brfarmers html
brfarmersDiffNet html
c.diffnet html
classify_adopters html
classify_graph html
cumulative_adopt_count html
dgr html
diag_expand html
diffnet-arithmetic html
diffnet-class html
diffnet_check_attr_class html
diffnet_index html
diffnetmatmult html
diffreg html
diffusion-data html
diffusionMap html
drawColorKey html
edgelist_to_adjmat html
edges_coords html
ego_variance html
egonet_attrs html
exposure html
fakeDynEdgelist html
fakeEdgelist html
fakesurvey html
fakesurveyDyn html
grid_distribution html
hazard_rate html
igraph html
infection html
isolated html
kfamily html
kfamilyDiffNet html
matrix_compare html
medInnovations html
medInnovationsDiffNet html
mentor_matching html
moran html
netdiffuseR-graphs html
netdiffuseR-options html
netdiffuseR html
netmatch html
network html
nvertices html
permute_graph html
plot.diffnet html
plot_adopters html
plot_diffnet html
plot_diffnet2 html
plot_infectsuscep html
plot_threshold html
pretty_within html
rdiffnet html
read_pajek html
read_ucinet_head html
recode html
rescale_vertex_igraph html
rewire_graph html
rgraph_ba html
rgraph_er html
rgraph_ws html
ring_lattice html
round_to_seq html
select_egoalter html
struct_equiv html
struct_test html
summary.diffnet html
survey_to_diffnet html
threshold html
toa_diff html
toa_mat html
transformGraphBy html
vertex_covariate_compare html
vertex_covariate_dist html
weighted_var html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (netdiffuseR)