* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘mutationtypes’ ...
** package ‘mutationtypes’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘mutationtypes’
    finding HTML links ... done
    mutation_types_convert_pave_to_maf      html  
    mutation_types_convert_so_to_maf        html  
    mutation_types_identify                 html  
    mutation_types_maf                      html  
    mutation_types_maf_palette              html  
    mutation_types_pave                     html  
    mutation_types_pave_palette             html  
    mutation_types_so                       html  
    mutation_types_so_palette               html  
    mutationtypes-package                   html  
    select_most_severe_consequence_pave     html  
    select_most_severe_consequence_so       html  
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* creating tarball
packaged installation of ‘mutationtypes’ as ‘mutationtypes_0.0.1_R_x86_64-pc-linux-gnu.tar.gz’
* DONE (mutationtypes)