* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘mpath’ ...
** package ‘mpath’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-13) 13.2.0’
using Fortran compiler: ‘GNU Fortran (Debian 13.2.0-13) 13.2.0’
make[1]: Entering directory '/tmp/RtmpVBHMUJ/R.INSTALL2efadb54931084/mpath/src'
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c activeset.f -o activeset.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cfuns.c -o cfuns.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c compute_g.f -o compute_g.o
compute_g.f:41:14:
41 | if(z(i) .LE. s1)then
| ^
Warning: ‘s1’ may be used uninitialized [-Wmaybe-uninitialized]
compute_g.f:7:40:
7 | double precision PI, s, s1, s2, z(n), delta, gval(n)
| ^
note: ‘s1’ was declared here
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c compute_h.f -o compute_h.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c compute_u.f -o compute_u.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c compute_v.f -o compute_v.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c compute_wt3.f -o compute_wt3.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c compute_z.f -o compute_z.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c dnbinom.f -o dnbinom.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c dpois.f -o dpois.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c factorial.f -o factorial.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c gfunc.f -o gfunc.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c glmreg_fit_fortran.f -o glmreg_fit_fortran.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c glmregnb_fortran.f -o glmregnb_fortran.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c gradient.f -o gradient.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c init.f -o init.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c irglmreg_ad.f -o irglmreg_ad.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c irglmreg_fortran.f -o irglmreg_fortran.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c irglmreg_onelambda.f -o irglmreg_onelambda.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c lmax_zipath.f -o lmax_zipath.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c lmnetGLM.f -o lmnetGLM.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c lmnetGaussian.f -o lmnetGaussian.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c loss.f -o loss.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c loss2.f -o loss2.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c loss2_ccsvm.f -o loss2_ccsvm.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c loss3.f -o loss3.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c midloop.f -o midloop.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c midloopGLM.f -o midloopGLM.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mpath_init.c -o mpath_init.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c mutil.f -o mutil.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c nclreg_ad.f -o nclreg_ad.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c nclreg_fortran.f -o nclreg_fortran.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c nclreg_onelambda.f -o nclreg_onelambda.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c outloop.f -o outloop.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c outprod.f -o outprod.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c theta_ml.f -o theta_ml.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c update_wt.f -o update_wt.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c update_wt_ccsvm.f -o update_wt_ccsvm.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c zi_onelambda.f -o zi_onelambda.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c ziloss.f -o ziloss.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c zipath_active.f -o zipath_active.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c zipath_nonactive.f -o zipath_nonactive.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o mpath.so activeset.o cfuns.o compute_g.o compute_h.o compute_u.o compute_v.o compute_wt3.o compute_z.o dnbinom.o dpois.o factorial.o gfunc.o glmreg_fit_fortran.o glmregnb_fortran.o gradient.o init.o irglmreg_ad.o irglmreg_fortran.o irglmreg_onelambda.o lmax_zipath.o lmnetGLM.o lmnetGaussian.o loss.o loss2.o loss2_ccsvm.o loss3.o midloop.o midloopGLM.o mpath_init.o mutil.o nclreg_ad.o nclreg_fortran.o nclreg_onelambda.o outloop.o outprod.o theta_ml.o update_wt.o update_wt_ccsvm.o zi_onelambda.o ziloss.o zipath_active.o zipath_nonactive.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpVBHMUJ/R.INSTALL2efadb54931084/mpath/src'
make[1]: Entering directory '/tmp/RtmpVBHMUJ/R.INSTALL2efadb54931084/mpath/src'
make[1]: Leaving directory '/tmp/RtmpVBHMUJ/R.INSTALL2efadb54931084/mpath/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-mpath/00new/mpath/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘mpath’
finding HTML links ... done
be_zeroinfl html
breadReg html
breastfeed html
compute_g html
compute_wt html
conv2glmreg html
conv2zipath html
cv.glmreg html
cv.glmregNB html
cv.glmreg_fit html
cv.irglmreg html
cv.irglmreg_fit html
cv.irsvm html
cv.irsvm_fit html
cv.nclreg html
cv.nclreg_fit html
cv.zipath html
cv.zipath_fit html
docvisits html
estfunReg html
gfunc html
glmreg html
glmregNB html
glmreg_fit html
hessianReg html
irglm html
irglmreg html
irglmreg_fit html
irsvm html
irsvm_fit html
loss2 html
loss2_ccsvm html
loss3 html
meatReg html
methods html
mpath-internal html
ncl html
ncl_fit html
nclreg html
nclreg_fit html
p_zipath html
plot.glmreg html
predict.glmreg html
predict.zipath html
rzi html
sandwichReg html
se html
stan html
summary.glmregNB html
tuning_zipath html
update_wt html
zipath html
zipath_fit html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (mpath)