- using R version 4.6.1 Patched (2026-07-12 r90255)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-15 (Debian 15.3.0-1) 15.3.0
GNU Fortran (Debian 15.3.0-1) 15.3.0
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
* current time: 2026-07-15 15:45:51 UTC
- checking for file ‘mlma/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘mlma’ version ‘6.3-1’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘mlma’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [3s/4s] OK
- checking whether the package can be loaded with stated dependencies ... [3s/4s] OK
- checking whether the package can be unloaded cleanly ... [3s/5s] OK
- checking whether the namespace can be loaded with stated dependencies ... [3s/4s] OK
- checking whether the namespace can be unloaded cleanly ... [3s/4s] OK
- checking loading without being on the library search path ... [3s/4s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [35s/47s] OK
- checking Rd files ... [0s/1s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/0s] OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [12s/16s] ERROR
Running examples in ‘mlma-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plot.mlma.boot
> ### Title: Plot the "mlma.boot" Object
> ### Aliases: plot.mlma.boot
> ### Keywords: plot
>
> ### ** Examples
>
> data(sim.211)
> data1<-data.org(x=ifelse(sim.211$x>2.2,1,0), m=sim.211$m,
+ f02ky=list(1,c("x","x^2")),
+ f20ky=list(2,c("x","x^3")), f01km2=list(matrix(c(1,1),1),c("x^1.2","x^2.3")),
+ f01km1=list(matrix(c(2,1),1),"sqrt(x)+3"),level=sim.211$level)
> temp1.boot<-boot.mlma(y=sim.211$y, data1=data1,boot=2)
boundary (singular) fit: see help('isSingular')
Warning in checkConv(attr(opt, "derivs"), opt$par, ctrl = control$checkConv, :
Model failed to converge with max|grad| = 0.0216302 (tol = 0.002, component 1)
See ?lme4::convergence and ?lme4::troubleshooting.
[1] 1
boundary (singular) fit: see help('isSingular')
Error: Downdated VtV is not positive definite
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [25s/28s] OK
- checking PDF version of manual ... [5s/7s] OK
- checking HTML version of manual ... [2s/3s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 ERROR