* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘mixvlmc’ ...
** package ‘mixvlmc’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-24) 13.2.0’
make[1]: Entering directory '/tmp/RtmpQuPUXp/R.INSTALL30c4846211989c/mixvlmc/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c EdgeNode.cpp -o EdgeNode.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Module.cpp -o Module.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c SubSequence.cpp -o SubSequence.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c SuffixTree.cpp -o SuffixTree.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c after.cpp -o after.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c before.cpp -o before.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ctx_count.cpp -o ctx_count.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c exports_for_tests.cpp -o exports_for_tests.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c extptr_cpp.cpp -o extptr_cpp.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c utils.cpp -o utils.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o mixvlmc.so EdgeNode.o Module.o RcppExports.o SubSequence.o SuffixTree.o after.o before.o ctx_count.o exports_for_tests.o extptr_cpp.o utils.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpQuPUXp/R.INSTALL30c4846211989c/mixvlmc/src'
make[1]: Entering directory '/tmp/RtmpQuPUXp/R.INSTALL30c4846211989c/mixvlmc/src'
make[1]: Leaving directory '/tmp/RtmpQuPUXp/R.INSTALL30c4846211989c/mixvlmc/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-mixvlmc/00new/mixvlmc/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘mixvlmc’
finding HTML links ... done
as_covlmc html
as_sequence html
as_vlmc html
as_vlmc.ctx_tree_cpp html
autoplot.tune_covlmc html
autoplot.tune_vlmc html
children html
context_number html
context_number.covlmc html
contexts html
contexts.covlmc html
contexts.ctx_tree html
contexts.vlmc html
counts html
covariate_depth html
covariate_memory html
covlmc html
covlmc_control html
ctx_tree html
cutoff html
cutoff.covlmc html
cutoff.ctx_node html
cutoff.vlmc html
depth html
draw html
draw.covlmc html
draw.ctx_tree html
draw.vlmc html
draw_control html
find_sequence html
find_sequence.covlmc html
globalearthquake html
is_context html
is_covlmc html
is_ctx_tree html
is_merged html
is_reversed html
is_vlmc html
logLik.covlmc html
logLik.vlmc html
loglikelihood html
loglikelihood.covlmc html
merged_with html
metrics html
metrics.covlmc html
metrics.ctx_node html
metrics.ctx_node_covlmc html
metrics.vlmc html
mixvlmc-package html
model html
parent html
plot.tune_vlmc html
positions html
powerconsumption html
predict.covlmc html
predict.vlmc html
print.contexts html
prune html
prune.covlmc html
rev.ctx_node html
simulate.covlmc html
simulate.vlmc html
simulate.vlmc_cpp html
states html
trim html
trim.covlmc html
trim.vlmc html
trim.vlmc_cpp html
tune_covlmc html
tune_vlmc html
vlmc html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* creating tarball
packaged installation of ‘mixvlmc’ as ‘mixvlmc_0.2.1_R_x86_64-pc-linux-gnu.tar.gz’
* DONE (mixvlmc)