* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘metasnf’ ...
** this is package ‘metasnf’ version ‘2.1.2’
** package ‘metasnf’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘metasnf’
finding HTML links ... done
abcd_anxiety html
abcd_colour html
abcd_cort_sa html
abcd_cort_t html
abcd_depress html
abcd_h_income html
abcd_income html
abcd_pubertal html
abcd_subc_v html
add_columns html
add_settings_df_rows html
adjusted_rand_index_heatmap html
age_df html
alluvial_cluster_plot html
anxiety html
arrange_dll html
as.data.frame.data_list html
as.data.frame.ext_solutions_df html
as.data.frame.settings_df html
as.data.frame.snf_config html
as.data.frame.solutions_df html
as.data.frame.t_ext_solutions_df html
as.data.frame.t_solutions_df html
as.data.frame.weights_matrix html
as.list.clust_fns_list html
as.list.data_list html
as.list.dist_fns_list html
as.list.sim_mats_list html
as.list.snf_config html
as.matrix.ari_matrix html
as.matrix.weights_matrix html
as_ari_matrix html
as_data_list html
as_settings_df html
as_sim_mats_list html
as_snf_config html
as_weights_matrix html
assemble_data html
assoc_pval_heatmap html
auto_plot html
bar_plot html
batch_row_closure html
batch_snf html
batch_snf_subsamples html
cache_a_complete_example_ext_sol_df html
cache_a_complete_example_lp_ext_sol_df
html
cache_a_complete_example_sol_df html
calc_aris html
calc_assoc_pval html
calc_assoc_pval_matrix html
calc_nmis html
calculate_coclustering html
cancer_diagnosis_df html
cat_colours html
cell_significance_fn html
char_to_fac html
check_cfll_fn_args html
check_cfll_fns html
check_cfll_named html
check_cfll_unique_names html
check_compatible_sdf_cfl html
check_compatible_sdf_dfl html
check_compatible_sdf_wm html
check_dataless_annotations html
check_dfll_fn_args html
check_dfll_fn_names html
check_dfll_item_names html
check_dfll_subitems_are_fns html
check_dfll_unique_names html
check_dll_duplicate_components html
check_dll_duplicate_features html
check_dll_empty_input html
check_dll_four_subitems html
check_dll_inherits_list html
check_dll_subitem_classes html
check_dll_subitem_names html
check_dll_types html
check_dll_uid html
check_hm_dependencies html
check_sdfl_colnames html
check_sdfl_is_df html
check_sdfl_numeric html
check_similarity_matrices html
check_valid_k html
check_valid_sc html
chi_squared_pval html
clust_fns html
clust_fns_list html
cocluster_density html
cocluster_heatmap html
coclustering_coverage_check html
collapse_dl html
colour_scale html
convert_uids html
cort_sa html
cort_t html
data_list html
depress html
diagnosis_df html
discretisation html
discretisation_evec_data html
dist_fns html
dist_fns_list html
dl_variable_summary html
dlapply html
dll_uid_first_col html
domains html
dplyr_row_slice.ext_solutions_df html
dplyr_row_slice.solutions_df html
drop_cols html
drop_inputs html
ensure_dll_df html
esm_manhattan_plot html
estimate_nclust_given_graph html
expression_df html
ext_solutions_df html
extend_solutions html
fav_colour html
features html
fisher_exact_pval html
gender_df html
generate_annotations_list html
generate_clust_algs_list html
generate_distance_metrics_list html
generate_settings_matrix html
get_cluster_df html
get_cluster_solutions html
get_clusters html
get_complete_uids html
get_dist_matrix html
get_dl_uids html
get_heatmap_order html
get_matrix_order html
get_mean_pval html
get_min_pval html
get_pvals html
get_representative_solutions html
gexclude html
gselect html
income html
is_data_list html
jitter_plot html
label_meta_clusters html
label_prop html
label_propagate html
label_splits html
linear_adjust html
linear_model_pval html
mc_manhattan_plot html
merge.clust_fns_list html
merge.data_list html
merge.dist_fns_list html
merge.ext_solutions_df html
merge.settings_df html
merge.sim_mats_list html
merge.snf_config html
merge.solutions_df html
merge.t_ext_solutions_df html
merge.t_solutions_df html
merge.weights_matrix html
merge_df_list html
metasnf-package html
metasnf_alert html
metasnf_defunct html
metasnf_deprecated html
metasnf_error html
metasnf_warning html
methylation_df html
mock_ari_matrix html
mock_clust_fns_list html
mock_data_list html
mock_dist_fns_list html
mock_ext_solutions_df html
mock_mc_solutions_df html
mock_rep_solutions_df html
mock_settings_df html
mock_snf_config html
mock_solutions_df html
mock_t_solutions_df html
mock_weights_matrix html
n_features html
n_observations html
new_ari_matrix html
new_clust_fns_list html
new_data_list html
new_dist_fns_list html
new_ext_solutions_df html
new_settings_df html
new_sim_mats_list html
new_snf_config html
new_solutions_df html
new_weights_matrix html
not_shown_message html
numcol_to_numeric html
ord_reg_pval html
parallel_batch_snf html
pick_cols html
pl html
plot.ari_matrix html
plot.data_list html
plot.ext_solutions_df html
plot.snf_config html
plot.solutions_df html
prefix_dll_uid html
print.ari_matrix html
print.clust_fns_list html
print.data_list html
print.dist_fns_list html
print.ext_solutions_df html
print.settings_df html
print.sim_mats_list html
print.snf_config html
print.solutions_df html
print.t_ext_solutions_df html
print.t_solutions_df html
print.weights_matrix html
print_with_n_message html
print_with_t_message html
pubertal html
pval_heatmap html
quality_measures html
random_removal html
rbind.ext_solutions_df html
rbind.solutions_df html
rbind.t_solutions_df html
rbind.weights_matrix html
remove_dll_incomplete html
rename_dl html
reorder_dl_uids html
resample html
run_snf html
save_heatmap html
scale_diagonals html
settings_df html
shiny_annotator html
sim_mats_list html
similarity_matrix_heatmap html
similarity_matrix_path html
siw_euclidean_distance html
snf_config html
snf_scheme html
snf_step html
sol_df_col_order html
solutions_df html
split_parser html
str.ari_matrix html
str.clust_fns_list html
str.data_list html
str.dist_fns_list html
str.ext_solutions_df html
str.settings_df html
str.sim_mats_list html
str.snf_config html
str.solutions_df html
str.t_ext_solutions_df html
str.t_solutions_df html
str.weights_matrix html
subc_v html
subsample_dl html
subsample_pairwise_aris html
summarize_clust_fns_list html
summarize_dfl html
summarize_dl html
summarize_pvals html
summary.ari_matrix html
summary.clust_fns_list html
summary.data_list html
summary.dist_fns_list html
summary.ext_solutions_df html
summary.settings_df html
summary.sim_mats_list html
summary.snf_config html
summary.solutions_df html
summary.t_ext_solutions_df html
summary.t_solutions_df html
summary.weights_matrix html
summary_features html
train_test_assign html
uids html
validate_ari_matrix html
validate_clust_fns_list html
validate_data_list html
validate_dist_fns_list html
validate_ext_solutions_df html
validate_settings_df html
validate_sim_mats_list html
validate_snf_config html
validate_solutions_df html
validate_weights_matrix html
var_manhattan_plot html
weights_matrix html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (metasnf)