* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘metadynminer’ ...
** package ‘metadynminer’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/tmp/Rtmp6spRvg/R.INSTALL3f0e6e36208384/metadynminer/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c mm.cpp -o mm.o
mm.cpp: In function ‘Rcpp::NumericMatrix hills1p12(Rcpp::NumericVector, Rcpp::NumericVector, double, double, Rcpp::NumericVector, int, int, int)’:
mm.cpp:176:10: warning: unused variable ‘x’ [-Wunused-variable]
176 | double x,y,z;
| ^
mm.cpp:176:12: warning: unused variable ‘y’ [-Wunused-variable]
176 | double x,y,z;
| ^
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o metadynminer.so RcppExports.o mm.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmp6spRvg/R.INSTALL3f0e6e36208384/metadynminer/src'
make[1]: Entering directory '/tmp/Rtmp6spRvg/R.INSTALL3f0e6e36208384/metadynminer/src'
make[1]: Leaving directory '/tmp/Rtmp6spRvg/R.INSTALL3f0e6e36208384/metadynminer/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-metadynminer/00new/metadynminer/libs
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘metadynminer’
finding HTML links ... done
acealanme html
acealanme1d html
emptyhills html
feprof html
feprof.minima html
fes html
fes.hillsfile html
fes2 html
fes2.hillsfile html
fes2d21d html
fesminima html
fesminima.fes html
fespoint html
fespoint.hillsfile html
head.hillsfile html
lines.fes html
lines.hillsfile html
lines.nebpath html
linesonfes html
max.fes html
min.fes html
neb html
oneminimum html
oneminimum.fes html
plot.fes html
plot.hillsfile html
plot.minima html
plot.nebpath html
plot.profiles html
plotheights html
plotheights.hillsfile html
points.fes html
points.hillsfile html
points.nebpath html
pointsonfes html
print.fes html
print.hillsfile html
print.minima html
print.nebpath html
print.profiles html
prob html
read.hills html
read.plumed html
summary.fes html
summary.hillsfile html
summary.minima html
summary.nebpath html
summary.profiles html
tail.hillsfile html
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (metadynminer)