* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘manifold’ ...
** package ‘manifold’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’
using C++11
make[1]: Entering directory '/tmp/RtmpzI10ss/R.INSTALL5b620157f3f58/manifold/src'
g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -DARMA_DONT_USE_OPENMP -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -DARMA_DONT_USE_OPENMP -fpic  -g -O2 -Wall -pedantic -mtune=native   -c SO.cpp -o SO.o
g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -DARMA_DONT_USE_OPENMP -fpic  -g -O2 -Wall -pedantic -mtune=native   -c SPD.cpp -o SPD.o
g++-13 -std=gnu++11 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o manifold.so RcppExports.o SO.o SPD.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpzI10ss/R.INSTALL5b620157f3f58/manifold/src'
make[1]: Entering directory '/tmp/RtmpzI10ss/R.INSTALL5b620157f3f58/manifold/src'
make[1]: Leaving directory '/tmp/RtmpzI10ss/R.INSTALL5b620157f3f58/manifold/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-manifold/00new/manifold/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘manifold’
    finding HTML links ... done
    ExpM                                    html  
    GetSettingName                          html  
    LogM                                    html  
    LogMSPD                                 html  
    MakeSym                                 html  
    Normalize                               html  
    axisAngleRep                            html  
    basisTan                                html  
    coordToTanV                             html  
    createM                                 html  
    dimensions                              html  
    distance                                html  
    frechetMean                             html  
    frechetMedian                           html  
    geodesicCurve                           html  
    is.finiteDim                            html  
    listAvailMfd                            html  
    manifold                                html  
    metric                                  html  
    norm                                    html  
    origin                                  html  
    project                                 html  
    projectTangent                          html  
    rieExp                                  html  
    rieLog                                  html  
    rmfd                                    html  
    runifSphere                             html  
    tanVToCoord                             html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (manifold)