* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘magmaR’ ...
** this is package ‘magmaR’ version ‘1.0.4’
** package ‘magmaR’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘magmaR’
    finding HTML links ... done
    authentication-and-environments         html  
    magmaRset                               html  
    query                                   html  
    retrieve                                html  
    retrieveJSON                            html  
    retrieveMatrix                          html  
    retrieveMetadata                        html  
    retrieveProjects                        html  
    retrieve_SpecialCases                   html  
    updateFromDF                            html  
    updateMatrix                            html  
    updateValues                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (magmaR)