* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘ludic’ ...
** this is package ‘ludic’ version ‘0.2.1’
** package ‘ludic’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.3.0-8) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpJdXrT2/R.INSTALL38c49315e3c50e/ludic/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c agree_C.cpp -o agree_C.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c estep_C.cpp -o estep_C.o
estep_C.cpp: In function ‘arma::mat estep_C_vect(arma::mat, double, arma::colvec, arma::colvec)’:
estep_C.cpp:13:7: warning: unused variable ‘K’ [-Wunused-variable]
   13 |   int K = agreemat.n_cols;
      |       ^
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c loglik_FUN_C.cpp -o loglik_FUN_C.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c matchProbs_rank_full_C.cpp -o matchProbs_rank_full_C.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c matchingScore_C.cpp -o matchingScore_C.o
matchingScore_C.cpp: In function ‘arma::mat matchingScore_C(arma::mat, arma::vec, arma::vec, int, int)’:
matchingScore_C.cpp:20:7: warning: unused variable ‘N’ [-Wunused-variable]
   20 |   int N = agreemat.n_rows;
      |       ^
matchingScore_C.cpp: In function ‘arma::mat matchingScore_C_sparse_big(arma::mat, arma::mat, arma::vec, arma::vec)’:
matchingScore_C.cpp:68:11: warning: unused variable ‘l’ [-Wunused-variable]
   68 |       int l = j*nA + i;
      |           ^
matchingScore_C.cpp:59:7: warning: unused variable ‘N’ [-Wunused-variable]
   59 |   int N = nA*nB;
      |       ^
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o ludic.so RcppExports.o agree_C.o estep_C.o loglik_FUN_C.o matchProbs_rank_full_C.o matchingScore_C.o -fopenmp -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpJdXrT2/R.INSTALL38c49315e3c50e/ludic/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpJdXrT2/R.INSTALL38c49315e3c50e/ludic/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpJdXrT2/R.INSTALL38c49315e3c50e/ludic/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-ludic/00new/ludic/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘ludic’
    finding HTML links ... done
    EMstep_C_sparse_big                     html  
    RA                                      html  
    agree_C                                 html  
    atlas                                   html  
    comb_pvals                              html  
    em_winkler                              html  
    estep_C_vect                            html  
    logit                                   html  
    loglikC_bin                             html  
    ludic-package                           html  
    matchProbs_rank_full_C                  html  
    matchingScore_C                         html  
    matching_score                          html  
    pval_zscore                             html  
    recordLink                              html  
    strsplitC                               html  
    test_han2018                            html  
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ludic)