* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘lsirm12pl’ ...
** this is package ‘lsirm12pl’ version ‘2.0.0’
** package ‘lsirm12pl’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.3.0-12) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpJKQMPp/R.INSTALL4c8c62c30cee/lsirm12pl/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c lsirm1pl.cpp -o lsirm1pl.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c lsirm2pl.cpp -o lsirm2pl.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c lsirm_grm.cpp -o lsirm_grm.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c lsm.cpp -o lsm.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c utility_cpp.cpp -o utility_cpp.o
utility_cpp.cpp: In function ‘Rcpp::List log_likelihood_grm_cpp(arma::mat, int, int, arma::mat, arma::mat, double, arma::mat, arma::mat, double)’:
utility_cpp.cpp:145:22: warning: comparison of integer expressions of different signedness: ‘const arma::uword’ {aka ‘const unsigned int’} and ‘const int’ [-Wsign-compare]
145 | if(beta_est.n_rows != nitem || beta_est.n_cols != Kminus1){
| ~~~~~~~~~~~~~~~~^~~~~~~~
utility_cpp.cpp:145:50: warning: comparison of integer expressions of different signedness: ‘const arma::uword’ {aka ‘const unsigned int’} and ‘const int’ [-Wsign-compare]
145 | if(beta_est.n_rows != nitem || beta_est.n_cols != Kminus1){
| ~~~~~~~~~~~~~~~~^~~~~~~~~~
utility_cpp.cpp: In function ‘Rcpp::List log_likelihood_grm2pl_cpp(arma::mat, int, int, arma::mat, arma::mat, arma::mat, double, arma::mat, arma::mat, double)’:
utility_cpp.cpp:197:22: warning: comparison of integer expressions of different signedness: ‘const arma::uword’ {aka ‘const unsigned int’} and ‘const int’ [-Wsign-compare]
197 | if(beta_est.n_rows != nitem || beta_est.n_cols != Kminus1){
| ~~~~~~~~~~~~~~~~^~~~~~~~
utility_cpp.cpp:197:50: warning: comparison of integer expressions of different signedness: ‘const arma::uword’ {aka ‘const unsigned int’} and ‘const int’ [-Wsign-compare]
197 | if(beta_est.n_rows != nitem || beta_est.n_cols != Kminus1){
| ~~~~~~~~~~~~~~~~^~~~~~~~~~
utility_cpp.cpp:200:23: warning: comparison of integer expressions of different signedness: ‘const arma::uword’ {aka ‘const unsigned int’} and ‘const int’ [-Wsign-compare]
200 | if(alpha_est.n_rows != nitem){
| ~~~~~~~~~~~~~~~~~^~~~~~~~
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o lsirm12pl.so RcppExports.o lsirm1pl.o lsirm2pl.o lsirm_grm.o lsm.o utility_cpp.o -fopenmp -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpJKQMPp/R.INSTALL4c8c62c30cee/lsirm12pl/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpJKQMPp/R.INSTALL4c8c62c30cee/lsirm12pl/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpJKQMPp/R.INSTALL4c8c62c30cee/lsirm12pl/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-lsirm12pl/00new/lsirm12pl/libs
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘lsirm12pl’
finding HTML links ... done
BFPT html
TDRI html
diagnostic html
gof html
lsirm html
lsirm.formula html
lsirm12pl html
lsirm1pl html
lsirm1pl_fixed_gamma html
lsirm1pl_fixed_gamma_mar html
lsirm1pl_fixed_gamma_mcar html
lsirm1pl_mar html
lsirm1pl_mar_ss html
lsirm1pl_mcar html
lsirm1pl_mcar_ss html
lsirm1pl_normal_fixed_gamma html
lsirm1pl_normal_fixed_gamma_mar html
lsirm1pl_normal_fixed_gamma_mcar html
lsirm1pl_normal_mar html
lsirm1pl_normal_mar_ss html
lsirm1pl_normal_mcar html
lsirm1pl_normal_mcar_ss html
lsirm1pl_normal_o html
lsirm1pl_normal_ss html
lsirm1pl_o html
lsirm1pl_ss html
lsirm2pl html
lsirm2pl_fixed_gamma html
lsirm2pl_fixed_gamma_mar html
lsirm2pl_fixed_gamma_mcar html
lsirm2pl_mar html
lsirm2pl_mar_ss html
lsirm2pl_mcar html
lsirm2pl_mcar_ss html
lsirm2pl_normal_fixed_gamma html
lsirm2pl_normal_fixed_gamma_mar html
lsirm2pl_normal_fixed_gamma_mcar html
lsirm2pl_normal_mar html
lsirm2pl_normal_mar_ss html
lsirm2pl_normal_mcar html
lsirm2pl_normal_mcar_ss html
lsirm2pl_normal_o html
lsirm2pl_normal_ss html
lsirm2pl_o html
lsirm2pl_ss html
lsirmgrm html
lsirmgrm2pl html
lsirmgrm2pl_fixed_gamma html
lsirmgrm2pl_mar html
lsirmgrm2pl_mcar html
lsirmgrm2pl_o html
lsirmgrm2pl_ss html
lsirmgrm_fixed_gamma html
lsirmgrm_mar html
lsirmgrm_mcar html
lsirmgrm_o html
lsirmgrm_ss html
onepl html
plot html
print.summary.lsirm html
summary.lsirm html
twopl html
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (lsirm12pl)