* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘lme4’ ...
** package ‘lme4’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/tmp/Rtmpc7IOt4/R.INSTALL1909da3cf26b55/lme4/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Matrix/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O2 -Wall -pedantic -mtune=native -c external.cpp -o external.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Matrix/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O2 -Wall -pedantic -mtune=native -c glmFamily.cpp -o glmFamily.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Matrix/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O2 -Wall -pedantic -mtune=native -c optimizer.cpp -o optimizer.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Matrix/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O2 -Wall -pedantic -mtune=native -c predModule.cpp -o predModule.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Matrix/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O2 -Wall -pedantic -mtune=native -c respModule.cpp -o respModule.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o lme4.so external.o glmFamily.o optimizer.o predModule.o respModule.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmpc7IOt4/R.INSTALL1909da3cf26b55/lme4/src'
make[1]: Entering directory '/tmp/Rtmpc7IOt4/R.INSTALL1909da3cf26b55/lme4/src'
make[1]: Leaving directory '/tmp/Rtmpc7IOt4/R.INSTALL1909da3cf26b55/lme4/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-lme4/00new/lme4/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘lme4’
finding HTML links ... done
Arabidopsis html
Dyestuff html
GHrule html
GQdk html
InstEval html
NelderMead-class html
Nelder_Mead html
Pastes html
Penicillin html
VarCorr html
VerbAgg html
allFit html
bootMer html
cake html
cbpp html
checkConv html
confint.merMod html
convergence html
devcomp html
devfun2 html
drop1.merMod html
dummy html
expandDoubleVerts html
factorize html
findbars html
fixef html
fortify html
getME html
glmFamily-class html
glmFamily html
glmer html
glmer.nb html
glmerLaplaceHandle html
golden-class html
grouseticks html
hatvalues.merMod html
influence.merMod html
isNested html
isREML html
isSingular html
lmList html
lmList4-class html
lmResp-class html
lmResp html
lme4-package html
lme4_testlevel html
lmer html
lmerControl html
finding level-2 HTML links ... done
merMod-class html
merPredD-class html
merPredD html
mkMerMod html
mkReTrms html
mkRespMod html
mkSimulationTemplate html
mkVarCorr html
modular html
namedList html
ngrps html
nlformula html
nlmer html
nloptwrap html
nobars html
plot.merMod html
plots.thpr html
predict.merMod html
profile-methods html
pvalues html
ranef html
rePCA html
rePos-class html
rePos html
refit html
refitML html
residuals.merMod html
sigma html
simulate.formula html
simulate.merMod html
sleepstudy html
subbars html
troubleshooting html
utilities html
vcconv html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (lme4)