* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘lineagefreq’ ...
** this is package ‘lineagefreq’ version ‘0.2.0’
** package ‘lineagefreq’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘lineagefreq’
    finding HTML links ... done
    as.data.frame.lfq_data                  html  
    as_lfq_data                             html  
    augment.lfq_fit                         html  
    autoplot.lfq_fit                        html  
    autoplot.lfq_forecast                   html  
    backtest                                html  
    cdc_ba2_transition                      html  
    cdc_sarscov2_jn1                        html  
    coef.lfq_fit                            html  
    collapse_lineages                       html  
    compare_models                          html  
    filter_sparse                           html  
    fit_model                               html  
    forecast                                html  
    forecast.lfq_fit                        html  
    glance.lfq_fit                          html  
    growth_advantage                        html  
    influenza_h3n2                          html  
    is_lfq_data                             html  
    lfq_advantage                           html  
    lfq_data                                html  
    lfq_engines                             html  
    lfq_fit                                 html  
    lfq_forecast                            html  
    lfq_score                               html  
    lfq_stan_available                      html  
    lfq_summary                             html  
    lfq_version                             html  
    lineagefreq-package                     html  
    plot_backtest                           html  
    print.lfq_fit                           html  
    read_lineage_counts                     html  
    reexports                               html  
    register_engine                         html  
    sarscov2_us_2022                        html  
    score_forecasts                         html  
    sequencing_power                        html  
    simulate_dynamics                       html  
    summarize_emerging                      html  
    summary.lfq_fit                         html  
    tidy.lfq_fit                            html  
    unregister_engine                       html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (lineagefreq)