* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘ldsr’ ...
** this is package ‘ldsr’ version ‘0.0.2’
** package ‘ldsr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.3.0-10) 14.3.0’
using C++11
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpZxm9XK/R.INSTALL14daa81bc72a1c/ldsr/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c EM.cpp -o EM.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c utils.cpp -o utils.o
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o ldsr.so EM.o RcppExports.o utils.o -fopenmp -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpZxm9XK/R.INSTALL14daa81bc72a1c/ldsr/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpZxm9XK/R.INSTALL14daa81bc72a1c/ldsr/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpZxm9XK/R.INSTALL14daa81bc72a1c/ldsr/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-ldsr/00new/ldsr/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘ldsr’
    finding HTML links ... done
    KGE                                     html  
    Kalman_smoother                         html  
    LDS_BFGS                                html  
    LDS_BFGS_with_update                    html  
    LDS_EM                                  html  
    LDS_EM_restart                          html  
    LDS_GA                                  html  
    LDS_reconstruction                      html  
    LDS_rep                                 html  
    Mstep                                   html  
    NPannual                                html  
    NPpc                                    html  
    NSE                                     html  
    PCR_ensemble_selection                  html  
    PCR_reconstruction                      html  
    RE                                      html  
    calculate_metrics                       html  
    call_method                             html  
    corr                                    html  
    cvLDS                                   html  
    cvPCR                                   html  
    exp_ci                                  html  
    inv_boxcox                              html  
    ldsr                                    html  
    make_Z                                  html  
    make_init                               html  
    metrics_with_transform                  html  
    nRMSE                                   html  
    negLogLik                               html  
    one_LDS_rep                             html  
    one_lds_cv                              html  
    one_pcr_cv                              html  
    penalized_likelihood                    html  
    propagate                               html  
    theta                                   html  
    vec_to_list                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ldsr)