* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘lame’ ... ** this is package ‘lame’ version ‘1.3.4’ ** package ‘lame’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-16 (Debian 16.2.0-1) 16.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpcRtAcM/R.INSTALL3fc4eb7445652/lame/src' g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -c Xbeta_cpp.cpp -o Xbeta_cpp.o g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -c dynamic_additive_effects.cpp -o dynamic_additive_effects.o g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -c dynamic_beta.cpp -o dynamic_beta.o dynamic_beta.cpp: In function ‘void accumulate_Omega_h(const arma::mat&, const arma::mat&, const arma::mat&, const arma::mat&, const arma::vec&, double, double, bool, bool, bool, arma::mat&, arma::vec&)’: dynamic_beta.cpp:119:19: warning: unused variable ‘n_obs’ [-Wunused-variable] 119 | const int n_obs = Xdyn_t.n_rows; | ^~~~~ g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -c dynamic_latent_factors.cpp -o dynamic_latent_factors.o g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -c dynamic_latent_factors_bip.cpp -o dynamic_latent_factors_bip.o g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -c four_cycles.cpp -o four_cycles.o g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -c get_EZ_bip.cpp -o get_EZ_bip.o g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -c get_EZ_cpp.cpp -o get_EZ_cpp.o g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -c poisson_functions.cpp -o poisson_functions.o g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -c rUV_rep_fc_cpp.cpp -o rUV_rep_fc_cpp.o g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -c rUV_sym_fc_cpp.cpp -o rUV_sym_fc_cpp.o g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -c rZ_batch_fc_cpp.cpp -o rZ_batch_fc_cpp.o g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -c rZ_bin_fused.cpp -o rZ_bin_fused.o g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -c rbeta_ab_bip_fc_cpp.cpp -o rbeta_ab_bip_fc_cpp.o g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -c rbeta_ab_rep_fc_cpp.cpp -o rbeta_ab_rep_fc_cpp.o rbeta_ab_rep_fc_cpp.cpp: In function ‘arma::vec rmvnorm_cpp(arma::vec, arma::mat)’: rbeta_ab_rep_fc_cpp.cpp:26:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare] 26 | for(int i = 0; i < mu.size(); i++) { | ~~^~~~~~~~~~~ rbeta_ab_rep_fc_cpp.cpp:24:7: warning: unused variable ‘n’ [-Wunused-variable] 24 | int n = 1; | ^ g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -c rbeta_debug.cpp -o rbeta_debug.o g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -c rrho_mh_rep_cpp.cpp -o rrho_mh_rep_cpp.o g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -c rs2_rep_fc_cpp.cpp -o rs2_rep_fc_cpp.o g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -c uvg_updates_bip.cpp -o uvg_updates_bip.o uvg_updates_bip.cpp: In function ‘arma::cube sample_U_bip_cpp(const arma::cube&, const arma::cube&, const arma::mat&, const arma::vec&, const arma::vec&)’: uvg_updates_bip.cpp:24:22: warning: unused variable ‘nB’ [-Wunused-variable] 24 | const unsigned int nB = R.n_cols; | ^~ uvg_updates_bip.cpp:26:22: warning: unused variable ‘RB’ [-Wunused-variable] 26 | const unsigned int RB = V.n_cols; | ^~ uvg_updates_bip.cpp: In function ‘arma::cube sample_V_bip_cpp(const arma::cube&, const arma::cube&, const arma::mat&, const arma::vec&, const arma::vec&)’: uvg_updates_bip.cpp:78:22: warning: unused variable ‘nA’ [-Wunused-variable] 78 | const unsigned int nA = R.n_rows; | ^~ uvg_updates_bip.cpp:81:22: warning: unused variable ‘RA’ [-Wunused-variable] 81 | const unsigned int RA = U.n_cols; | ^~ g++-16 -std=gnu++20 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o lame.so RcppExports.o Xbeta_cpp.o dynamic_additive_effects.o dynamic_beta.o dynamic_latent_factors.o dynamic_latent_factors_bip.o four_cycles.o get_EZ_bip.o get_EZ_cpp.o poisson_functions.o rUV_rep_fc_cpp.o rUV_sym_fc_cpp.o rZ_batch_fc_cpp.o rZ_bin_fused.o rbeta_ab_bip_fc_cpp.o rbeta_ab_rep_fc_cpp.o rbeta_debug.o rrho_mh_rep_cpp.o rs2_rep_fc_cpp.o uvg_updates_bip.o -fopenmp -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -latomic_asneeded -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpcRtAcM/R.INSTALL3fc4eb7445652/lame/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpcRtAcM/R.INSTALL3fc4eb7445652/lame/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpcRtAcM/R.INSTALL3fc4eb7445652/lame/src' installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-lame/00new/lame/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘lame’ finding HTML links ... done IR90s html Xbeta html Xbeta_bip_cpp html Xcol html Xdyad html Xrow html Y html YX_bin html YX_bin_list html YX_bin_long html YX_cbin html YX_frn html YX_nrm html YX_ord html ab_plot html ab_plot.ame_als html addhealthc3 html addhealthc9 html als_dynamic_beta html als_start_vals html ame html ame_als html ame_als_bootstrap html ame_als_refit html ame_memory_settings html ame_memory_usage html ame_options html ame_parallel html array_to_list html as_draws html as_draws.ame html as_lame_y html autoplot.ame_als html autoplot.lame html bipartite_helpers html boot_ame-no-fitted html check_format html coef.als_dynamic_beta html coef.ame html coef.ame_als html coef.boot_ame html coldwar html combine_ame_chains html compact_ame html compute_XtX_Xty_bip_cpp html compute_gof_bipartite html compute_mcmc_diagnostics html comtrade html confint.ame html confint.ame_als html confint.boot_ame html design_array html design_array_listwisedel html detect_change_point html dot-actor_ffbs_path html dot-ame_propagate_cov_na html dot-build_full_design html dot-exact_center_per_actor html dot-fit_actor_order html dot-reorder_newdata_actors html dot-rotation_drift_diagnostic html dot-sweep_per_actor_exact html dot-xbeta_newdata html dutchcollege html dynamic_beta_prior_summary html el2sm html evaluate_heldout html ffbs_vecG html fitted.ame html fitted.ame_als html fitted.lame html forecast_pit html formula.ame html get_EZ_dynamic_beta_cpp html get_design_rep html get_fit_object html get_start_vals html glance html glance.ame html glance.ame_als html gof html gof_plot html gof_plot.ame_als html gof_stats html gof_stats_bipartite html gof_stats_unipartite html gof_temporal html init_dynamic_ab_cpp html init_dynamic_positions html lame-package html lame html lame_als html lame_multi html lame_parallel html lame_resume html lame_snap_als html latent_positions html lazegalaw html lfo html list_to_array html list_to_array_bipartite html logLik.ame html logLik.ame_als html log_phi_diff html loo html loo.ame html mhalf html nobs.ame html nobs.ame_als html nodematch html per_actor_slopes html plot.ame html plot.ame_als html plot.lame html posterior_options html posterior_quantiles html precomputeX html predict.ame html predict.ame_als html predict.lame html prediction_draws_long html print.als_dynamic_beta html print.ame html print.ame.sim html print.ame_als html print.boot_ame html print.gof_temporal html print.lame html print.lame_multi html print.lfo_lame html print.per_actor_slopes html print.summary.ame html print.summary.ame_als html print.summary.lame html prior_summary html procrustes_align html rSab_fc html rSuv_fc html rUV_dynamic_bip_fc_cpp html rUV_dynamic_fc html rUV_dynamic_fc_cpp html rUV_dynamic_snap_fc html rUV_dynamic_snap_fc_cpp html rUV_dynamic_t_fc html rUV_dynamic_t_fc_cpp html rUV_fc html rUV_rep_fc html rUV_sym_fc html rZ_bin_bip_batch_cpp html rZ_bin_fc html rZ_cbin_bip_fc html rZ_cbin_fc html rZ_frn_bip_fc html rZ_frn_fc html rZ_nrm_batch_cpp html rZ_nrm_fc html rZ_ord_bip_fc html rZ_ord_explicit_fc html rZ_ord_fc html rZ_ord_sym_explicit_fc html rZ_ord_sym_fc html rZ_pois_bip_fc html rZ_pois_fc html raSab_bin_fc html raSab_cbin_fc html raSab_frn_fc html rbeta_ab_bip_gibbs_cpp html rbeta_ab_fc html rbeta_ab_rep_fc html read_log_lik html reconstruct_EZ html reexports html residuals.ame html residuals.ame_als html residuals.lame html rhat_dynamic_beta html rmvnorm html rrho_mh html rs2_fc html rs2_rep_fc html rtnorm_interval_logp html rwish html sample_ab_bipartite html sample_alpha_cowles html sample_beta_dynamic_cpp html sample_beta_static_cpp html sample_dynamic_ab_cpp html sample_rho_G_mh html sample_rho_ab_cpp html sample_rho_beta_cpp html sample_rho_uv html sample_sigma_G2 html sample_sigma_ab_cpp html sample_sigma_beta_cpp html sample_sigma_uv html sampler_describe html sampsonmonks html sheep html simY_bin html simY_frn html simY_nrm html simY_ord html simY_pois html simZ html simulate.ame html simulate.ame_als html simulate.lame html simulate_posterior html sm2el html snap_category_summary html snap_index_draws html snap_index_summary html snap_rank_summary html summary.ame html summary.ame.sim html summary.ame_als html summary.boot_ame html summary.lame html summary.lame.sim html tidy html tidy.ame html tidy.ame_als html tidy.boot_ame html trace_plot html update.ame html update.ame_als html update_variances_bipartite html uv_plot html vcov.ame html vcov.ame_als html vcov.boot_ame html vignette_data html waic.ame html zscores html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lame)