* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘labdsv’ ...
** package ‘labdsv’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-13) 13.2.0’
using Fortran compiler: ‘GNU Fortran (Debian 13.2.0-13) 13.2.0’
make[1]: Entering directory '/tmp/RtmpTNJIgg/R.INSTALL2c943b56236c84/labdsv/src'
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c dsvdis.f90 -o dsvdis.o
dsvdis.f90:85:18:
85 | a = a + weight(k)
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
dsvdis.f90:86:18:
86 | b = b + weight(k)
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
dsvdis.f90:88:18:
88 | b = b + weight(k)
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
dsvdis.f90:129:18:
129 | a = a + 2 * weight(k)
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
dsvdis.f90:130:18:
130 | b = b + 2 * weight(k)
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
dsvdis.f90:132:18:
132 | b = b + weight(k)
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
dsvdis.f90:175:18:
175 | a = a + weight(k)
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
dsvdis.f90:177:18:
177 | b = b + weight(k)
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
dsvdis.f90:179:18:
179 | c = c + weight(k)
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
dsvdis.f90:389:27:
389 | double precision temp
| 1
Warning: Unused variable ‘temp’ declared at (1) [-Wunused-variable]
dsvdis.f90:388:29:
388 | double precision totsum
| 1
Warning: Unused variable ‘totsum’ declared at (1) [-Wunused-variable]
dsvdis.f90:376:34:
376 | subroutine hellin(mat,weight,nrow,ncol,dis,rowsum)
| 1
Warning: Unused dummy argument ‘weight’ at (1) [-Wunused-dummy-argument]
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c euclid.f90 -o euclid.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c indval.f90 -o indval.o
indval.f90:156:16:
156 | index = unifrnd()*pool+1
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c ismetric.f90 -o ismetric.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c metric.f90 -o metric.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c orddist.f90 -o orddist.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c pip.f90 -o pip.o
pip.f90:32:18:
32 | r = (y(i) - polyy(j)) / ydiff
| 1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion]
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c random.c -o random.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c stepdist.f90 -o stepdist.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c thull.f90 -o thull.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o labdsv.so dsvdis.o euclid.o indval.o ismetric.o metric.o orddist.o pip.o random.o stepdist.o thull.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpTNJIgg/R.INSTALL2c943b56236c84/labdsv/src'
make[1]: Entering directory '/tmp/RtmpTNJIgg/R.INSTALL2c943b56236c84/labdsv/src'
make[1]: Leaving directory '/tmp/RtmpTNJIgg/R.INSTALL2c943b56236c84/labdsv/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-labdsv/00new/labdsv/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘labdsv’
finding HTML links ... done
abundtrans html
abuocc html
as.dsvord html
brycesite html
bryceveg html
calibrate html
ccm html
compspec html
concov html
const html
convex html
defactorize html
dematrify html
dga html
disana html
dropplt html
dropspc html
dsvdis html
dsvls html
envrtest html
euclidify html
factorize html
gsr html
hellinger html
homoteneity html
importance html
indval html
isamic html
labdsv.internal html
matrify html
metrify html
neighbors html
nmds html
ordcomm html
ordcomp html
orddist html
ordneighbors html
ordpart html
ordtest html
pca html
pco html
plot.dsvord html
predict html
raretaxa html
reconcile html
rndcomm html
rnddist html
samptot html
spcdisc html
spcmax html
stepdist html
thull html
tsne html
vegtab html
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (labdsv)