* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘kyotil’ ...
** this is package ‘kyotil’ version ‘2024.11-01’
** package ‘kyotil’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (Debian 14.3.0-10) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpQq4zzW/R.INSTALL3a0a5352695623/kyotil/src'
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c Call_kernel.c -o Call_kernel.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c Call_matrix.c -o Call_matrix.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c fromKutil.c -o fromKutil.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c kernels.c -o kernels.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c matrix.c -o matrix.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c registerDynamicSymbol.c -o registerDynamicSymbol.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c sresids.c -o sresids.o
gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o kyotil.so Call_kernel.o Call_matrix.o fromKutil.o kernels.o matrix.o registerDynamicSymbol.o sresids.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpQq4zzW/R.INSTALL3a0a5352695623/kyotil/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpQq4zzW/R.INSTALL3a0a5352695623/kyotil/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpQq4zzW/R.INSTALL3a0a5352695623/kyotil/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-kyotil/00new/kyotil/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘kyotil’
    finding HTML links ... done
    DMHeatMap                               html  
    Deming                                  html  
    VEplot                                  html  
    age_calc                                html  
    auc                                     html  
    base                                    html  
    binaryloess                             html  
    cox.zph.2                               html  
    cross_validation                        html  
    get.sim.res                             html  
    getK                                    html  
    imaging_spatial_analysis                html  
    iorw                                    html  
    kid                                     html  
    kyotil                                  html  
    make.timedep.dataset                    html  
    math                                    html  
    matrix                                  html  
    matrix2                                 html  
    misc                                    html  
    p.adj.perm                              html  
    plotting                                html  
    print                                   html  
    random                                  html  
    regression.model.functions              html  
    roc                                     html  
    sim.dat.tvarying                        html  
    stat                                    html  
    string                                  html  
    tests                                   html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (kyotil)