* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘karyotapR’ ...
** this is package ‘karyotapR’ version ‘1.0.2’
** package ‘karyotapR’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘karyotapR’
    finding HTML links ... done
    CreateTapestriExperiment                html  
    PCAKneePlot                             html  
    TapestriExperiment-class                html  
    assayBoxPlot                            html  
    assayHeatmap                            html  
    calcCopyNumber                          html  
    calcGMMCopyNumber                       html  
    calcNormCounts                          html  
    calcSmoothCopyNumber                    html  
    callSampleLables                        html  
    corner                                  html  
    countBarcodedReads                      html  
    getChrOrder                             html  
    getCytobands                            html  
    getGMMBoundaries                        html  
    getTidyData                             html  
    karyotapR-package                       html  
    moveNonGenomeProbes                     html  
    newTapestriExperimentExample            html  
    plotCopyNumberGMM                       html  
    reducedDimPlot                          html  
    runClustering                           html  
    runPCA                                  html  
    runUMAP                                 html  
    slotGettersSetters                      html  
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (karyotapR)