• using R version 4.6.1 Patched (2026-06-28 r90209)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-15 (Debian 15.3.0-1) 15.3.0     GNU Fortran (Debian 15.3.0-1) 15.3.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-07-08 14:46:44 UTC
• checking for file ‘jstable/DESCRIPTION’ ... OK
• this is package ‘jstable’ version ‘1.3.25’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘jstable’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [4s/5s] OK
• checking whether the package can be loaded with stated dependencies ... [3s/4s] OK
• checking whether the package can be unloaded cleanly ... [3s/4s] OK
• checking whether the namespace can be loaded with stated dependencies ... [3s/5s] OK
• checking whether the namespace can be unloaded cleanly ... [4s/5s] OK
• checking loading without being on the library search path ... [4s/5s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [40s/50s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/1s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [16s/21s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [49s/63s] ERROR   Running ‘testthat.R’ [49s/62s] Running the tests in ‘tests/testthat.R’ failed. Complete output:   > library(testthat)   > library(jstable)   >   > test_check("jstable")   Independent Sampling design (with replacement)   svydesign(id = ~1, data = lung)   Independent Sampling design (with replacement)   svydesign(id = ~1, data = lung)   Independent Sampling design (with replacement)   svydesign(id = ~1, data = lung)   Independent Sampling design (with replacement)   subset(data, get(var_subgroup) == .)   Independent Sampling design (with replacement)   subset(data, get(var_subgroup) == .)   Independent Sampling design (with replacement)   svydesign(id = ~1, data = lung)   Independent Sampling design (with replacement)   subset(data, get(var_subgroup) == .)   Independent Sampling design (with replacement)   subset(data, get(var_subgroup) == .)   Independent Sampling design (with replacement)   svydesign(id = ~1, data = lung)   Independent Sampling design (with replacement)   svydesign(id = ~1, data = lung)   Independent Sampling design (with replacement)   subset(data, get(var_subgroup) == .)   Independent Sampling design (with replacement)   subset(data, get(var_subgroup) == .)   Independent Sampling design (with replacement)   svydesign(id = ~1, data = lung)   Independent Sampling design (with replacement)   subset(data, get(var_subgroup) == .)   Independent Sampling design (with replacement)   subset(data, get(var_subgroup) == .)   Independent Sampling design (with replacement)   svydesign(id = ~1, data = lung)   Independent Sampling design (with replacement)   svydesign(id = ~1, data = lung)   Independent Sampling design (with replacement)   subset(data, get(var_subgroup) == .)   Independent Sampling design (with replacement)   subset(data, get(var_subgroup) == .)   Independent Sampling design (with replacement)   svydesign(id = ~1, data = lung)   Independent Sampling design (with replacement)   subset(data, get(var_subgroup) == .)   Independent Sampling design (with replacement)   subset(data, get(var_subgroup) == .)   Independent Sampling design (with replacement)   svydesign(id = ~1, data = lung)   Independent Sampling design (with replacement)   svydesign(id = ~1, data = lung)   Independent Sampling design (with replacement)   subset(data, get(var_subgroup) == .)   Independent Sampling design (with replacement)   subset(data, get(var_subgroup) == .)   Independent Sampling design (with replacement)   svydesign(id = ~1, data = lung)   Independent Sampling design (with replacement)   subset(data, get(var_subgroup) == .)   Independent Sampling design (with replacement)   subset(data, get(var_subgroup) == .)   Independent Sampling design (with replacement)   svydesign(id = ~1, data = lung)   Independent Sampling design (with replacement)   svydesign(id = ~1, data = lung)   Independent Sampling design (with replacement)   subset(data, get(var_subgroup) == .)   Independent Sampling design (with replacement)   subset(data, get(var_subgroup) == .)   Independent Sampling design (with replacement)   svydesign(id = ~1, data = lung)   Independent Sampling design (with replacement)   subset(data, get(var_subgroup) == .)   Independent Sampling design (with replacement)   subset(data, get(var_subgroup) == .)   Independent Sampling design (with replacement)   svydesign(id = ~1, data = lung)   Independent Sampling design (with replacement)   svydesign(id = ~1, data = lung)   Independent Sampling design (with replacement)   subset(data, get(var_subgroup) == .)   Independent Sampling design (with replacement)   subset(data, get(var_subgroup) == .)   Independent Sampling design (with replacement)   svydesign(id = ~1, data = lung)   Independent Sampling design (with replacement)   subset(data, get(var_subgroup) == .)   Independent Sampling design (with replacement)   subset(data, get(var_subgroup) == .)   Stratified Independent Sampling design (with replacement)   dpbc <- survey::svydesign(id = ~1, prob = ~randprob, strata = ~edema, data = subset(pbc, randomized))   Stratified Independent Sampling design (with replacement)   dpbc <- survey::svydesign(id = ~1, prob = ~randprob, strata = ~edema, data = subset(pbc, randomized))   Stratified Independent Sampling design (with replacement)   dpbc <- survey::svydesign(id = ~1, prob = ~randprob, strata = ~edema, data = subset(pbc, randomized))   Stratified Independent Sampling design (with replacement)   dpbc <- survey::svydesign(id = ~1, prob = ~randprob, strata = ~edema, data = subset(pbc, randomized))   Stratified Independent Sampling design (with replacement)   dpbc <- survey::svydesign(id = ~1, prob = ~randprob, strata = ~edema, data = subset(pbc, randomized))   Stratified Independent Sampling design (with replacement)   dpbc <- survey::svydesign(id = ~1, prob = ~randprob, strata = ~edema, data = subset(pbc, randomized))   Stratified Independent Sampling design (with replacement)   dpbc <- survey::svydesign(id = ~1, prob = ~randprob, strata = ~edema, data = subset(pbc, randomized))   Stratified Independent Sampling design (with replacement)   dpbc <- survey::svydesign(id = ~1, prob = ~randprob, strata = ~edema, data = subset(pbc, randomized))   Stratified Independent Sampling design (with replacement)   dpbc <- survey::svydesign(id = ~1, prob = ~randprob, strata = ~edema, data = subset(pbc, randomized))   Stratified Independent Sampling design (with replacement)   dpbc <- survey::svydesign(id = ~1, prob = ~randprob, strata = ~edema, data = subset(pbc, randomized))   Stratified Independent Sampling design (with replacement)   dpbc <- survey::svydesign(id = ~1, prob = ~randprob, strata = ~edema, data = subset(pbc, randomized))   Stratified Independent Sampling design (with replacement)   dpbc <- survey::svydesign(id = ~1, prob = ~randprob, strata = ~edema, data = subset(pbc, randomized))   Stratified Independent Sampling design (with replacement)   dpbc <- survey::svydesign(id = ~1, prob = ~randprob, strata = ~edema, data = subset(pbc, randomized))   Stratified Independent Sampling design (with replacement)   dpbc <- survey::svydesign(id = ~1, prob = ~randprob, strata = ~edema, data = subset(pbc, randomized))   Stratified Independent Sampling design (with replacement)   dpbc <- survey::svydesign(id = ~1, prob = ~randprob, strata = ~edema, data = subset(pbc, randomized))   Saving _problems/test-regtable-129.R   [ FAIL 1 | WARN 21 | SKIP 0 | PASS 131 ]      ══ Failed tests ════════════════════════════════════════════════════════════════   ── Error ('test-regtable.R:129:3'): Run lmer.display ───────────────────────────   <Rcpp::exception/C++Error/error/condition>   Error: Downdated VtV is not positive definite   Backtrace:        ▆     1. ├─testthat::expect_is(...) at test-regtable.R:129:3     2. │ └─testthat::quasi_label(enquo(object), label)     3. │ └─rlang::eval_bare(expr, quo_get_env(quo))     4. ├─jstable::lmer.display(...)     5. │ └─base::summary(lmerMod.obj)     6. └─lme4::glmer(...)     7. └─lme4::optimizeGlmer(...)     8. └─lme4:::optwrap(...)     9. ├─base::withCallingHandlers(...)    10. ├─base::do.call(optfun, arglist)    11. └─lme4 (local) `<fn>`(...)    12. ├─nM$newf(fn(nM$xeval()))    13. │ └─base::stopifnot(length(value <- as.numeric(value)) == 1L)    14. └─lme4 (local) fn(nM$xeval())    15. └─lme4 (local) pwrssUpdate(...)      [ FAIL 1 | WARN 21 | SKIP 0 | PASS 131 ]   Error:   ! Test failures.   Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [41s/52s] OK
• checking PDF version of manual ... [5s/8s] OK
• checking HTML version of manual ... [3s/5s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 ERROR