Install log for 'jack'

* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘jack’ ...
** package ‘jack’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-13) 13.2.0’
using C++17
make[1]: Entering directory '/tmp/RtmpkLp77D/R.INSTALL3c10862cd9a85e/jack/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c jack.cpp -o jack.o
In file included from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/cstdfloat.hpp:27,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/detail/float128_functions.hpp:15,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/detail/fpclassify.hpp:13,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/detail/default_ops.hpp:15,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/detail/generic_interconvert.hpp:12,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/number.hpp:12,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/gmp.hpp:11,
                 from jack.h:5,
                 from jack.cpp:1:
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/math/cstdfloat/cstdfloat_cmath.hpp:714:16: warning: non-standard suffix on floating constant [-Wpedantic]
  714 |                else if (x == BOOST_FLOAT128_C(0.0))
      |                ^~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/math/cstdfloat/cstdfloat_cmath.hpp:717:16: warning: non-standard suffix on floating constant [-Wpedantic]
  717 |                if (::BOOST_CSTDFLOAT_FLOAT128_FABS(x) < BOOST_CSTDFLOAT_FLOAT128_MIN)
      |                ^~
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c jackEval.cpp -o jackEval.o
In file included from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/cstdfloat.hpp:27,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/detail/float128_functions.hpp:15,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/detail/fpclassify.hpp:13,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/detail/default_ops.hpp:15,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/detail/generic_interconvert.hpp:12,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/number.hpp:12,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/gmp.hpp:11,
                 from jack.h:5,
                 from jackEval.cpp:1:
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/math/cstdfloat/cstdfloat_cmath.hpp:714:16: warning: non-standard suffix on floating constant [-Wpedantic]
  714 |                else if (x == BOOST_FLOAT128_C(0.0))
      |                ^~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/math/cstdfloat/cstdfloat_cmath.hpp:717:16: warning: non-standard suffix on floating constant [-Wpedantic]
  717 |                if (::BOOST_CSTDFLOAT_FLOAT128_FABS(x) < BOOST_CSTDFLOAT_FLOAT128_MIN)
      |                ^~
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c polynomials.cpp -o polynomials.o
In file included from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/cstdfloat.hpp:27,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/detail/float128_functions.hpp:15,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/detail/fpclassify.hpp:13,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/detail/default_ops.hpp:15,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/detail/generic_interconvert.hpp:12,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/number.hpp:12,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/gmp.hpp:11,
                 from jack.h:5,
                 from polynomials.cpp:1:
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/math/cstdfloat/cstdfloat_cmath.hpp:714:16: warning: non-standard suffix on floating constant [-Wpedantic]
  714 |                else if (x == BOOST_FLOAT128_C(0.0))
      |                ^~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/math/cstdfloat/cstdfloat_cmath.hpp:717:16: warning: non-standard suffix on floating constant [-Wpedantic]
  717 |                if (::BOOST_CSTDFLOAT_FLOAT128_FABS(x) < BOOST_CSTDFLOAT_FLOAT128_MIN)
      |                ^~
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c shared.cpp -o shared.o
In file included from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/cstdfloat.hpp:27,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/detail/float128_functions.hpp:15,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/detail/fpclassify.hpp:13,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/detail/default_ops.hpp:15,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/detail/generic_interconvert.hpp:12,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/number.hpp:12,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/gmp.hpp:11,
                 from jack.h:5,
                 from shared.cpp:1:
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/math/cstdfloat/cstdfloat_cmath.hpp:714:16: warning: non-standard suffix on floating constant [-Wpedantic]
  714 |                else if (x == BOOST_FLOAT128_C(0.0))
      |                ^~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/math/cstdfloat/cstdfloat_cmath.hpp:717:16: warning: non-standard suffix on floating constant [-Wpedantic]
  717 |                if (::BOOST_CSTDFLOAT_FLOAT128_FABS(x) < BOOST_CSTDFLOAT_FLOAT128_MIN)
      |                ^~
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c utils.cpp -o utils.o
In file included from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/cstdfloat.hpp:27,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/detail/float128_functions.hpp:15,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/detail/fpclassify.hpp:13,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/detail/default_ops.hpp:15,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/detail/generic_interconvert.hpp:12,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/number.hpp:12,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/multiprecision/gmp.hpp:11,
                 from jack.h:5,
                 from utils.cpp:1:
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/math/cstdfloat/cstdfloat_cmath.hpp:714:16: warning: non-standard suffix on floating constant [-Wpedantic]
  714 |                else if (x == BOOST_FLOAT128_C(0.0))
      |                ^~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include/boost/math/cstdfloat/cstdfloat_cmath.hpp:717:16: warning: non-standard suffix on floating constant [-Wpedantic]
  717 |                if (::BOOST_CSTDFLOAT_FLOAT128_FABS(x) < BOOST_CSTDFLOAT_FLOAT128_MIN)
      |                ^~
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o jack.so RcppExports.o jack.o jackEval.o polynomials.o shared.o utils.o -lgmp -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpkLp77D/R.INSTALL3c10862cd9a85e/jack/src'
make[1]: Entering directory '/tmp/RtmpkLp77D/R.INSTALL3c10862cd9a85e/jack/src'
make[1]: Leaving directory '/tmp/RtmpkLp77D/R.INSTALL3c10862cd9a85e/jack/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-jack/00new/jack/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘jack’
    finding HTML links ... done
    ESF                                     html  
    Jack                                    html  
    JackCPP                                 html  
    JackPol                                 html  
    JackPolCPP                              html  
    KostkaNumbers                           html  
    MSF                                     html  
    Schur                                   html  
    SchurCPP                                html  
    SchurPol                                html  
    SchurPolCPP                             html  
    Zonal                                   html  
    ZonalCPP                                html  
    ZonalPol                                html  
    ZonalPolCPP                             html  
    ZonalQ                                  html  
    ZonalQCPP                               html  
    ZonalQPol                               html  
    ZonalQPolCPP                            html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (jack)