* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘jaccard’ ...
** package ‘jaccard’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-13) 13.2.0’
using C++11
make[1]: Entering directory '/tmp/RtmpxnoASK/R.INSTALL3437903b759b9/jaccard/src'
g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c jaccard_mca_rcpp.cpp -o jaccard_mca_rcpp.o
jaccard_mca_rcpp.cpp: In member function ‘bool LayeredMarginal::next()’:
jaccard_mca_rcpp.cpp:418:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
  418 |     for(unsigned int jj = 0; jj < isotopeNo; jj++ )
      |     ^~~
jaccard_mca_rcpp.cpp:442:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
  442 |       return true;
      |       ^~~~~~
g++-13 -std=gnu++11 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o jaccard.so RcppExports.o jaccard_mca_rcpp.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpxnoASK/R.INSTALL3437903b759b9/jaccard/src'
make[1]: Entering directory '/tmp/RtmpxnoASK/R.INSTALL3437903b759b9/jaccard/src'
make[1]: Leaving directory '/tmp/RtmpxnoASK/R.INSTALL3437903b759b9/jaccard/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-jaccard/00new/jaccard/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘jaccard’
    finding HTML links ... done
    jaccard                                 html  
    jaccard.ev                              html  
    jaccard.rahman                          html  
    jaccard.test                            html  
    jaccard.test.asymptotic                 html  
    jaccard.test.bootstrap                  html  
    jaccard.test.exact                      html  
    jaccard.test.mca                        html  
    jaccard.test.pairwise                   html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (jaccard)