Install log for 'intsurv'

* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘intsurv’ ...
** this is package ‘intsurv’ version ‘0.3.0’
** package ‘intsurv’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.3.0-10) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpUpoABa/R.INSTALL344bb976625990/intsurv/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I../inst/include -fopenmp -DARMA_USE_CURRENT -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I../inst/include -fopenmp -DARMA_USE_CURRENT -fpic  -g -O2 -Wall -pedantic -mtune=native   -c assessment.cpp -o assessment.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I../inst/include -fopenmp -DARMA_USE_CURRENT -fpic  -g -O2 -Wall -pedantic -mtune=native   -c coxph_cure.cpp -o coxph_cure.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I../inst/include -fopenmp -DARMA_USE_CURRENT -fpic  -g -O2 -Wall -pedantic -mtune=native   -c coxph_cure_mar.cpp -o coxph_cure_mar.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I../inst/include -fopenmp -DARMA_USE_CURRENT -fpic  -g -O2 -Wall -pedantic -mtune=native   -c coxph_reg.cpp -o coxph_reg.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I../inst/include -fopenmp -DARMA_USE_CURRENT -fpic  -g -O2 -Wall -pedantic -mtune=native   -c cross-validation.cpp -o cross-validation.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I../inst/include -fopenmp -DARMA_USE_CURRENT -fpic  -g -O2 -Wall -pedantic -mtune=native   -c logistic_reg.cpp -o logistic_reg.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I../inst/include -fopenmp -DARMA_USE_CURRENT -fpic  -g -O2 -Wall -pedantic -mtune=native   -c nonparametric.cpp -o nonparametric.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I../inst/include -fopenmp -DARMA_USE_CURRENT -fpic  -g -O2 -Wall -pedantic -mtune=native   -c utils.cpp -o utils.o
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o intsurv.so RcppExports.o assessment.o coxph_cure.o coxph_cure_mar.o coxph_reg.o cross-validation.o logistic_reg.o nonparametric.o utils.o -fopenmp -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpUpoABa/R.INSTALL344bb976625990/intsurv/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpUpoABa/R.INSTALL344bb976625990/intsurv/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpUpoABa/R.INSTALL344bb976625990/intsurv/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-intsurv/00new/intsurv/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘intsurv’
    finding HTML links ... done
    BIC.cox_cure                            html  
    BIC.cox_cure_net                        html  
    Survi-class                             html  
    Survi                                   html  
    bootSe                                  html  
    cIndex                                  html  
    coef-iCoxph-method                      html  
    coef.cox_cure                           html  
    coef.cox_cure_net                       html  
    cox_cure                                html  
    cox_cure_net                            html  
    iCoxph-class                            html  
    iCoxph                                  html  
    iCoxph.control                          html  
    iCoxph.start                            html  
    intsurv                                 html  
    show-method                             html  
    simData4cure                            html  
    simData4iCoxph                          html  
    summary-iCoxph-method                   html  
    summary.cox_cure                        html  
    summary.iCoxph-class                    html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (intsurv)