* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘inferCSN’ ...
** this is package ‘inferCSN’ version ‘1.2.0’
** package ‘inferCSN’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.3.0-8) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpPag5wn/R.INSTALL24c14c44802da/inferCSN/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c filter_sort_matrix.cpp -o filter_sort_matrix.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c network_evaluation.cpp -o network_evaluation.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c network_format.cpp -o network_format.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c weight_sift.cpp -o weight_sift.o
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o inferCSN.so RcppExports.o filter_sort_matrix.o network_evaluation.o network_format.o weight_sift.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpPag5wn/R.INSTALL24c14c44802da/inferCSN/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpPag5wn/R.INSTALL24c14c44802da/inferCSN/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpPag5wn/R.INSTALL24c14c44802da/inferCSN/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-inferCSN/00new/inferCSN/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘inferCSN’
    finding HTML links ... done
    calculate_accuracy                      html  
    calculate_auc                           html  
    calculate_auprc                         html  
    calculate_auroc                         html  
    calculate_f1                            html  
    calculate_gene_rank                     html  
    calculate_ji                            html  
    calculate_metrics                       html  
    calculate_precision                     html  
    calculate_recall                        html  
    calculate_si                            html  
    example_ground_truth                    html  
    example_matrix                          html  
    example_meta_data                       html  
    filter_sort_matrix                      html  
    fit_srm                                 html  
    inferCSN-package                        html  
    inferCSN                                html  
    infercsn_logo                           html  
    meta_cells                              html  
    network_format                          html  
    network_sift                            html  
    plot_coefficient                        html  
    plot_coefficients                       html  
    plot_contrast_networks                  html  
    plot_dynamic_networks                   html  
    plot_edges_comparison                   html  
    plot_embedding                          html  
    plot_histogram                          html  
    plot_network_heatmap                    html  
    plot_scatter                            html  
    plot_static_networks                    html  
    prepare_binary_predictions              html  
    print.infercsn_logo                     html  
    single_network                          html  
    subsampling                             html  
    weight_sift                             html  
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (inferCSN)