* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘icosa’ ...
** this is package ‘icosa’ version ‘0.12.0’
** package ‘icosa’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (Debian 14.3.0-5) 14.3.0’
using C++ compiler: ‘g++-14 (Debian 14.3.0-5) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpuVS0g3/R.INSTALL1348224ee0ede8/icosa/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c PointInTetra.cpp -o PointInTetra.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RccpSource_.cpp -o RccpSource_.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Rccp_coordinateFlattening.cpp -o Rccp_coordinateFlattening.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c plottingMatrices.cpp -o plottingMatrices.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c rotation.cpp -o rotation.o
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o icosa.so PointInTetra.o RccpSource_.o Rccp_coordinateFlattening.o RcppExports.o init.o plottingMatrices.o rotation.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpuVS0g3/R.INSTALL1348224ee0ede8/icosa/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpuVS0g3/R.INSTALL1348224ee0ede8/icosa/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpuVS0g3/R.INSTALL1348224ee0ede8/icosa/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-icosa/00new/icosa/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
in method for ‘OccupiedFaces’ with signature ‘"trigrid","SpatRaster"’: no definition for class “SpatRaster”
in method for ‘vertices’ with signature ‘"facelayer"’: no definition for class “facelayer”
in method for ‘faces’ with signature ‘"gridlayer"’: no definition for class “gridlayer”
in method for ‘edges’ with signature ‘"facelayer"’: no definition for class “facelayer”
in method for ‘centers’ with signature ‘"facelayer"’: no definition for class “facelayer”
in method for ‘resample’ with signature ‘"SpatRaster","trigrid"’: no definition for class “SpatRaster”
Creating a generic function for ‘sd’ from package ‘stats’ in package ‘icosa’
in method for ‘[’ with signature ‘"gridlayer","SpatExtent","missing"’: no definition for class “SpatExtent”
in method for ‘resample’ with signature ‘"facelayer","SpatRaster"’: no definition for class “SpatRaster”
in method for ‘resample’ with signature ‘"SpatRaster","facelayer"’: no definition for class “SpatRaster”
in method for ‘grapply’ with signature ‘x="data.frame",out="SpatRaster"’: no definition for class “SpatRaster”
in method for ‘grapply’ with signature ‘x="matrix",out="SpatRaster"’: no definition for class “SpatRaster”
** help
*** installing help indices
converting help for package ‘icosa’
finding HTML links ... done
CarToPol html
PolToCar html
SpLines html
SpPolygons html
arcdist html
arcdistmat html
arcpoints html
arcs html
cellocator html
centers html
chullsphere html
edgelength html
edges html
extract-methods html
face2nb html
facelayer-class html
faces html
faces3d html
grapply html
gridgraph html
gridlabs html
gridlabs3d html
guides3d html
heatMapLegend html
hexagrid-class html
hexguide html
holes html
icosa html
length html
lines-methods html
lines3d html
locate html
names html
newgraph html
newsf html
newsp html
occupied html
orientation html
patches html
plot html
plot3d html
pos html
resample html
rotate html
rpsphere html
saveOBJ html
spacing html
subset html
surfacearea html
surfacecentroid html
translate html
trigrid-class html
triguide html
trishape html
values html
vertexradius html
vertices html
vicinity html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (icosa)