* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘hmmTMB’ ...
** this is package ‘hmmTMB’ version ‘1.1.2’
** package ‘hmmTMB’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp4BA2WS/R.INSTALLa3e50631b17a9/hmmTMB/src'
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript --vanilla -e "invisible(TMB::compile('hmmTMB.cpp', safebounds = FALSE, safeunload = FALSE))"
Note: Using Makevars in /home/hornik/.R/Makevars-gcc 
using C++ compiler: ‘g++-14 (Debian 14.3.0-10) 14.3.0’
make[2]: Entering directory '/home/hornik/tmp/scratch/Rtmp4BA2WS/R.INSTALLa3e50631b17a9/hmmTMB/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/TMB/include" -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppEigen/include"   -DTMB_EIGEN_DISABLE_WARNINGS   -DTMB_LIB_INIT=R_init_hmmTMB  -DCPPAD_FRAMEWORK -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/TMB/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppEigen/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c hmmTMB.cpp -o hmmTMB.o
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o hmmTMB.so hmmTMB.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[2]: Leaving directory '/home/hornik/tmp/scratch/Rtmp4BA2WS/R.INSTALLa3e50631b17a9/hmmTMB/src'
make[2]: Entering directory '/home/hornik/tmp/scratch/Rtmp4BA2WS/R.INSTALLa3e50631b17a9/hmmTMB/src'
make[2]: Leaving directory '/home/hornik/tmp/scratch/Rtmp4BA2WS/R.INSTALLa3e50631b17a9/hmmTMB/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp4BA2WS/R.INSTALLa3e50631b17a9/hmmTMB/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-hmmTMB/00new/hmmTMB/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘hmmTMB’
    finding HTML links ... done
    Dist                                    html  
    HMM                                     html  
    MarkovChain                             html  
    Observation                             html  
    as_character_formula                    html  
    as_sparse                               html  
    bdiag_check                             html  
    check_contiguous                        html  
    cov_grid                                html  
    dvm                                     html  
    dwrpcauchy                              html  
    find_re                                 html  
    gdeterminant                            html  
    hmmTMB-package                          html  
    hmmTMB_cols                             html  
    invmlogit                               html  
    is_whole_number                         html  
    logLik.HMM                              html  
    logsumexp                               html  
    make_cov                                html  
    make_formulas                           html  
    make_matrices                           html  
    mlogit                                  html  
    mvnorm_invlink                          html  
    mvnorm_link                             html  
    na_fill                                 html  
    prec_to_cov                             html  
    quad_pos_solve                          html  
    rvm                                     html  
    rwrpcauchy                              html  
    strip_comments                          html  
    update.HMM                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (hmmTMB)