* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘hhdynamics’ ...
** this is package ‘hhdynamics’ version ‘1.3.3’
** package ‘hhdynamics’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-16 (Debian 16.2.0-1) 16.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmptHzUUQ/R.INSTALL2b9d962665cb19/hhdynamics/src'
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c mcmc_function_hh.cpp -o mcmc_function_hh.o
g++-16 -std=gnu++20 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o hhdynamics.so RcppExports.o mcmc_function_hh.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -latomic_asneeded -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmptHzUUQ/R.INSTALL2b9d962665cb19/hhdynamics/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmptHzUUQ/R.INSTALL2b9d962665cb19/hhdynamics/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmptHzUUQ/R.INSTALL2b9d962665cb19/hhdynamics/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-hhdynamics/00new/hhdynamics/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘hhdynamics’
    finding HTML links ... done
    SI                                      html  
    coef.hhdynamics_fit                     html  
    create_wide_data                        html  
    hhdynamics-package                      html  
    household_dynamics                      html  
    inputdata                               html  
    para                                    html  
    plot.hhdynamics_fit                     html  
    plot_attack_rate                        html  
    plot_covariates                         html  
    plot_diagnostics                        html  
    plot_household                          html  
    plot_transmission                       html  
    print.hhdynamics_fit                    html  
    print.summary.hhdynamics_fit            html  
    run_MCMC                                html  
    simulate_data                           html  
    summary.hhdynamics_fit                  html  
    table_attack_rates                      html  
    table_covariates                        html  
    table_parameters                        html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (hhdynamics)