* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘hermiter’ ...
** package ‘hermiter’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/tmp/Rtmp3rB7rc/R.INSTALL3e0e8a5510c8e6/hermiter/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c hermite_utils.cpp -o hermite_utils.o
In file included from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppParallel/include/RcppParallel/TinyThread.h:7,
from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppParallel/include/RcppParallel.h:6,
from hermite_utils.cpp:4:
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppParallel/include/RcppParallel/Common.h: In instantiation of ‘int RcppParallel::resolveValue(const char*, T, U) [with T = long unsigned int; U = int]’:
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppParallel/include/RcppParallel.h:57:28: required from ‘void RcppParallel::parallelReduce(std::size_t, std::size_t, Reducer&, std::size_t, int) [with Reducer = HermiteS; std::size_t = long unsigned int]’
hermite_utils.cpp:430:17: required from here
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppParallel/include/RcppParallel/Common.h:16:23: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare]
16 | if (requestedValue != defaultValue && requestedValue > 0)
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o hermiter.so RcppExports.o hermite_utils.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmp3rB7rc/R.INSTALL3e0e8a5510c8e6/hermiter/src'
make[1]: Entering directory '/tmp/Rtmp3rB7rc/R.INSTALL3e0e8a5510c8e6/hermiter/src'
make[1]: Leaving directory '/tmp/Rtmp3rB7rc/R.INSTALL3e0e8a5510c8e6/hermiter/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-hermiter/00new/hermiter/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘hermiter’
finding HTML links ... done
IQR html
IQR.default html
IQR.hermite_estimator_univar html
cor html
cum_prob html
cum_prob.hermite_estimator_bivar html
cum_prob.hermite_estimator_univar html
dens html
dens.hermite_estimator_bivar html
dens.hermite_estimator_univar html
density.hermite_estimator_bivar html
density.hermite_estimator_univar html
gauss_hermite_quad_100 html
hcdf html
hcdf.hermite_estimator_bivar html
hcdf.hermite_estimator_univar html
hermite_estimator html
hermite_estimator_bivar html
hermite_estimator_univar html
hermite_function html
hermite_function_N html
hermite_function_sum_N html
hermite_function_sum_serial html
hermite_int_full html
hermite_int_full_domain html
hermite_int_lower html
hermite_int_upper html
hermite_integral_val html
hermite_integral_val_upper html
hermite_normalization html
hermite_normalization_N html
hermite_polynomial html
hermite_polynomial_N html
hermiter-package html
initialize_batch_bivar html
initialize_batch_univar html
kendall html
kendall.hermite_estimator_bivar html
median.hermite_estimator_univar html
merge_hermite html
merge_hermite_bivar html
merge_hermite_univar html
merge_moments_and_count_bivar html
merge_moments_and_count_univar html
merge_pair html
merge_pair.hermite_estimator_bivar html
merge_pair.hermite_estimator_univar html
merge_standardized_helper_bivar html
merge_standardized_helper_univar html
plot.hcdf_bivar html
plot.hcdf_univar html
plot.hdensity_bivar html
plot.hdensity_univar html
print.hcdf_bivar html
print.hcdf_univar html
print.hdensity_bivar html
print.hdensity_univar html
print.hermite_estimator_bivar html
print.hermite_estimator_univar html
quant html
quant.hermite_estimator_univar html
quantile.hermite_estimator_univar html
spearmans html
spearmans.hermite_estimator_bivar html
standardizeInputs html
standardizeInputsEW html
summary.hcdf_bivar html
summary.hcdf_univar html
summary.hermite_estimator_bivar html
summary.hermite_estimator_univar html
update_sequential html
update_sequential.hermite_estimator_bivar
html
update_sequential.hermite_estimator_univar
html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (hermiter)