* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘hapsim’ ...
** package ‘hapsim’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/tmp/RtmpiHxWlp/R.INSTALL3dfef332834901/hapsim/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c hapsim.c -o hapsim.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c registerDynamicSymbol.c -o registerDynamicSymbol.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o hapsim.so hapsim.o registerDynamicSymbol.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpiHxWlp/R.INSTALL3dfef332834901/hapsim/src'
make[1]: Entering directory '/tmp/RtmpiHxWlp/R.INSTALL3dfef332834901/hapsim/src'
make[1]: Leaving directory '/tmp/RtmpiHxWlp/R.INSTALL3dfef332834901/hapsim/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-hapsim/00new/hapsim/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘hapsim’
    finding HTML links ... done
    ACEdata                                 html  
    allelefreqs                             html  
    checkpd                                 html  
    cor2dprime                              html  
    cortocov                                html  
    covtocor                                html  
    divlocus                                html  
    haplodata                               html  
    haplofreqs                              html  
    haplosim                                html  
    ldplot                                  html  
    makepd                                  html  
    mergemats                               html  
    mse                                     html  
    sumsqscale                              html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (hapsim)