* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘gmGeostats’ ...
** package ‘gmGeostats’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/tmp/Rtmp0If3Ra/R.INSTALLf6ac64adbf049/gmGeostats/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gmGeostats.c -o gmGeostats.o
gmGeostats.c: In function ‘fbandGauss’:
gmGeostats.c:222:57: warning: "/*" within comment [-Wcomment]
222 | /* omega = norm_rand() * M_SQRT2 / range * M_SQRT_3; /* sqrt(3) needed to produce effective range*/
|
gmGeostats.c: In function ‘CMVTurningBands’:
gmGeostats.c:478:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
478 | for(i=0;i<n;i++)
| ^~~
gmGeostats.c:484:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
484 | Z+=d*n;
| ^
gmGeostats.c:405:10: warning: unused variable ‘phase’ [-Wunused-variable]
405 | double phase; /* 20220424: removed ,amp; */
| ^~~~~
gmGeostats.c: In function ‘CCondSim’:
gmGeostats.c:537:11: warning: unused variable ‘shift’ [-Wunused-variable]
537 | int sim,shift;
| ^~~~~
gmGeostats.c:536:11: warning: unused variable ‘k’ [-Wunused-variable]
536 | int i,j,k; /* 20220424 removed: ,s,ss,ev,l; */
| ^
gmGeostats.c:536:9: warning: unused variable ‘j’ [-Wunused-variable]
536 | int i,j,k; /* 20220424 removed: ,s,ss,ev,l; */
| ^
gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o gmGeostats.so gmGeostats.o -lgfortran -lm -lquadmath -fopenmp -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmp0If3Ra/R.INSTALLf6ac64adbf049/gmGeostats/src'
make[1]: Entering directory '/tmp/Rtmp0If3Ra/R.INSTALLf6ac64adbf049/gmGeostats/src'
make[1]: Leaving directory '/tmp/Rtmp0If3Ra/R.INSTALLf6ac64adbf049/gmGeostats/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-gmGeostats/00new/gmGeostats/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘gmGeostats’
finding HTML links ... done
AnisotropyRangeMatrix html
AnisotropyScaling html
CholeskyDecomposition html
DSpars html
DataFrameStack.data.frame html
EmpiricalStructuralFunctionSpecification-class
html
GridOrNothing-class html
KrigingNeighbourhood html
LMCAnisCompo html
LeaveOneOut html
Maf.data.frame html
finding level-2 HTML links ... done
ModelStructuralFunctionSpecification-class
html
NGSAustralia html
NfoldCrossValidation html
SequentialSimulation html
TurningBands html
Windarling html
accuracy html
ana html
anaBackward html
anaForward html
anis_GSLIBpar2A html
as.AnisotropyRangeMatrix html
as.AnisotropyScaling html
as.CompLinModCoReg html
as.LMCAnisCompo html
as.array.DataFrameStack html
as.directorVector html
as.function.gmCgram html
as.gmCgram html
as.gmEVario html
as.gmSpatialModel html
as.gstat html
as.gstatVariogram html
as.list.DataFrameStack html
as.logratioVariogram html
as.logratioVariogramAnisotropy html
as.variogramModel html
coloredBiplot.genDiag html
constructMask html
dimnames.DataFrameStack html
fit_lmc html
getMask html
getStackElement html
getTellus html
gmApply html
gmGaussianMethodParameters-class html
gmGaussianSimulationAlgorithm-class html
gmMPSParameters-class html
gmNeighbourhoodSpecification-class html
gmSimulationAlgorithm-class html
gmSpatialDataContainer-class html
gmSpatialMethodParameters-class html
gmSpatialModel-class html
gmTrainingImage-class html
gmUnconditionalSpatialModel-class html
gmValidationStrategy-class html
gsi.Cokriging html
gsi.CondTurningBands html
gsi.DS html
gsi.EVario2D html
gsi.EVario3D html
gsi.TurningBands html
gsi.calcCgram html
gsi.gstatCokriging2compo html
gsi.orig html
gsi.produceV html
has.missings.data.frame html
image.logratioVariogramAnisotropy html
image.mask html
image_cokriged html
is.anisotropySpecification html
is.isotropic html
length.gmCgram html
logratioVariogram-acomp-method html
logratioVariogram html
make.gmCompositionalGaussianSpatialModel
html
make.gmCompositionalMPSSpatialModel html
make.gmMultivariateGaussianSpatialModel
html
mean.accuracy html
mean.spatialDecorrelationMeasure html
ndirections html
noSpatCorr.test html
pairsmap html
plot.accuracy html
plot.gmCgram html
plot.gmEVario html
plot.logratioVariogramAnisotropy html
plot.swarmPlot html
plus-.gmCgram html
precision html
predict.LMCAnisCompo html
predict.genDiag html
predict_gmSpatialModel html
print.mask html
pwlrmap html
setCgram html
setGridOrder html
setMask html
sortDataInGrid html
spatialDecorrelation html
spatialGridAcomp html
spatialGridRmult html
spectralcolors html
sphTrans html
stackDim-Spatial-method html
stackDim html
sub-.DataFrameStack html
sub-.gmCgram html
sub-.logratioVariogramAnisotropy html
sub-sub-.gmCgram html
swarmPlot html
swath html
unmask.data.frame html
validate html
variogramModelPlot.gmEVario html
variogramModelPlot.gstatVariogram html
variogramModelPlot.logratioVariogram html
variogram_gmSpatialModel html
write.GSLib html
xvErrorMeasures.data.frame html
xvErrorMeasures.default html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (gmGeostats)