* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘glpkAPI’ ...
** package ‘glpkAPI’ successfully unpacked and MD5 sums checked
** using staged installation
checking for gcc... gcc-13
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc-13 accepts -g... yes
checking for gcc-13 option to accept ISO C89... none needed
checking how to run the C preprocessor... gcc-13 -E
checking for prefix by checking for glpsol... /usr/bin/glpsol
configure: found executable glpsol in /usr
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking glpk.h usability... yes
checking glpk.h presence... yes
checking for glpk.h... yes
checking for library containing glp_create_prob... none required
checking for glp_print_ranges... yes
configure: creating ./config.status
config.status: creating src/Makevars
config.status: creating src/config.h
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/tmp/RtmpBmTE2a/R.INSTALL3b31bf2d15d14d/glpkAPI/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DHAVE_CONFIG_H -I/usr/include -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c glpkAPI.c -o glpkAPI.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DHAVE_CONFIG_H -I/usr/include -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c glpkCallback.c -o glpkCallback.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DHAVE_CONFIG_H -I/usr/include -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o glpkAPI.so glpkAPI.o glpkCallback.o init.o -L/usr/lib -L/usr/lib64 -lglpk -lgmp -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpBmTE2a/R.INSTALL3b31bf2d15d14d/glpkAPI/src'
make[1]: Entering directory '/tmp/RtmpBmTE2a/R.INSTALL3b31bf2d15d14d/glpkAPI/src'
make[1]: Leaving directory '/tmp/RtmpBmTE2a/R.INSTALL3b31bf2d15d14d/glpkAPI/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-glpkAPI/00new/glpkAPI/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘glpkAPI’
finding HTML links ... done
addColsGLPK html
addRowsGLPK html
advBasisGLPK html
bfExistsGLPK html
bfUpdatedGLPK html
checkDupGLPK html
copyProbGLPK html
cpxBasisGLPK html
createIndexGLPK html
delColsGLPK html
delProbGLPK html
delRowsGLPK html
deleteIndexGLPK html
eraseProbGLPK html
factorizeGLPK html
findColGLPK html
findRowGLPK html
getBfcpGLPK html
getBheadGLPK html
getCbindGLPK html
getColDualGLPK html
getColDualIptGLPK html
getColKindGLPK html
getColLowBndGLPK html
getColNameGLPK html
getColPrimGLPK html
getColPrimIptGLPK html
getColStatGLPK html
getColTypeGLPK html
getColUppBndGLPK html
getColsDualGLPK html
getColsDualIptGLPK html
getColsKindGLPK html
getColsLowBndsGLPK html
getColsPrimGLPK html
getColsPrimIptGLPK html
getColsStatGLPK html
getColsUppBndsGLPK html
getDualStatGLPK html
getInteriorParmGLPK html
getMIPParmGLPK html
getMatColGLPK html
getMatRowGLPK html
getNumBinGLPK html
getNumColsGLPK html
getNumIntGLPK html
getNumNnzGLPK html
getNumRowsGLPK html
getObjCoefGLPK html
getObjCoefsGLPK html
getObjDirGLPK html
getObjNameGLPK html
getObjValGLPK html
getObjValIptGLPK html
getPrimStatGLPK html
getProbNameGLPK html
getRbindGLPK html
getRiiGLPK html
getRowDualGLPK html
getRowDualIptGLPK html
getRowLowBndGLPK html
getRowNameGLPK html
getRowPrimGLPK html
getRowPrimIptGLPK html
getRowStatGLPK html
getRowTypeGLPK html
getRowUppBndGLPK html
getRowsDualGLPK html
getRowsDualIptGLPK html
getRowsLowBndsGLPK html
getRowsPrimGLPK html
getRowsPrimIptGLPK html
getRowsStatGLPK html
getRowsTypesGLPK html
getRowsUppBndsGLPK html
getSimplexParmGLPK html
getSjjGLPK html
getSolStatGLPK html
getSolStatIptGLPK html
getUnbndRayGLPK html
glpkAPI-package html
glpkConstants html
glpkPtr-class html
initProbGLPK html
loadMatrixGLPK html
mipColValGLPK html
mipColsValGLPK html
mipObjValGLPK html
mipRowValGLPK html
mipRowsValGLPK html
mipStatusGLPK html
mplAllocWkspGLPK html
mplBuildProbGLPK html
mplFreeWkspGLPK html
mplGenerateGLPK html
mplPostsolveGLPK html
mplReadDataGLPK html
mplReadModelGLPK html
printIptGLPK html
printMIPGLPK html
printRangesGLPK html
printSolGLPK html
readIptGLPK html
readLPGLPK html
readMIPGLPK html
readMPSGLPK html
readProbGLPK html
readSolGLPK html
return_codeGLPK html
scaleProbGLPK html
setBfcpGLPK html
setColBndGLPK html
setColKindGLPK html
setColNameGLPK html
setColStatGLPK html
setColsBndsGLPK html
setColsBndsObjCoefsGLPK html
setColsKindGLPK html
setColsNamesGLPK html
setDefaultIptParmGLPK html
setDefaultMIPParmGLPK html
setDefaultSmpParmGLPK html
setInteriorParmGLPK html
setMIPParmGLPK html
setMatColGLPK html
setMatRowGLPK html
setObjCoefGLPK html
setObjCoefsGLPK html
setObjDirGLPK html
setObjNameGLPK html
setProbNameGLPK html
setRhsZeroGLPK html
setRiiGLPK html
setRowBndGLPK html
setRowNameGLPK html
setRowStatGLPK html
setRowsBndsGLPK html
setRowsNamesGLPK html
setSimplexParmGLPK html
setSjjGLPK html
solveInteriorGLPK html
solveMIPGLPK html
solveSimplexExactGLPK html
solveSimplexGLPK html
sortMatrixGLPK html
status_codeGLPK html
stdBasisGLPK html
termOutGLPK html
unscaleProbGLPK html
versionGLPK html
warmUpGLPK html
writeIptGLPK html
writeLPGLPK html
writeMIPGLPK html
writeMPSGLPK html
writeProbGLPK html
writeSolGLPK html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (glpkAPI)