Install log for 'glmm'

* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘glmm’ ...
** package ‘glmm’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-13) 13.2.0’
make[1]: Entering directory '/tmp/Rtmp2Ee10S/R.INSTALL2d29535eb7bbd9/glmm/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c cp3.c -o cp3.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c cpp3.c -o cpp3.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c cum3.c -o cum3.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c distRand.c -o distRand.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c distRand3c.c -o distRand3c.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c elGH.c -o elGH.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c elc.c -o elc.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c elval.c -o elval.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c glmm_init.c -o glmm_init.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c hess.c -o hess.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c i.c -o i.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c m.c -o m.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c mcse.c -o mcse.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c t.c -o t.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c valgrad.c -o valgrad.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o glmm.so cp3.o cpp3.o cum3.o distRand.o distRand3c.o elGH.o elc.o elval.o glmm_init.o hess.o i.o m.o mcse.o t.o valgrad.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmp2Ee10S/R.INSTALL2d29535eb7bbd9/glmm/src'
make[1]: Entering directory '/tmp/Rtmp2Ee10S/R.INSTALL2d29535eb7bbd9/glmm/src'
make[1]: Leaving directory '/tmp/Rtmp2Ee10S/R.INSTALL2d29535eb7bbd9/glmm/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-glmm/00new/glmm/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘glmm’
    finding HTML links ... done
    Booth2                                  html  
    BoothHobert                             html  
    bacteria                                html  
    bernoulli.glmm                          html  
    binomial.glmm                           html  
    cbpp2                                   html  
    coef.glmm                               html  
    confint.glmm                            html  
    glmm                                    html  
    logLik                                  html  
    mcse                                    html  
    mcvcov                                  html  
    murder                                  html  
    poisson.glmm                            html  
    radish2                                 html  
    salamander                              html  
    se                                      html  
    summary.glmm                            html  
    varcomps.glmm                           html  
    vcov.glmm                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (glmm)