* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘ggtern’ ... ** this is package ‘ggtern’ version ‘3.5.0’ ** package ‘ggtern’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘ggtern’ finding HTML links ... done aes html annotate html annotation_raster_tern html Rd warning: annotation_raster_tern.Rd:31: missing link ‘geom_raster’ approved_layers html Rd warning: approved_layers.Rd:18: missing link ‘geom_point’ Rd warning: approved_layers.Rd:18: missing link ‘geom_path’ Rd warning: approved_layers.Rd:18: missing link ‘geom_line’ Rd warning: approved_layers.Rd:18: missing link ‘geom_label’ Rd warning: approved_layers.Rd:18: missing link ‘geom_text’ Rd warning: approved_layers.Rd:18: missing link ‘geom_jitter’ Rd warning: approved_layers.Rd:18: missing link ‘geom_polygon’ Rd warning: approved_layers.Rd:18: missing link ‘geom_segment’ Rd warning: approved_layers.Rd:18: missing link ‘geom_count’ Rd warning: approved_layers.Rd:18: missing link ‘geom_curve’ Rd warning: approved_layers.Rd:18: missing link ‘geom_blank’ Rd warning: approved_layers.Rd:18: missing link ‘geom_rect’ Rd warning: approved_layers.Rd:23: missing link ‘stat_identity’ Rd warning: approved_layers.Rd:23: missing link ‘stat_sum’ Rd warning: approved_layers.Rd:23: missing link ‘stat_unique’ Rd warning: approved_layers.Rd:28: missing link ‘position_identity’ arrangeGrob html breaks_tern html coord_tern html Rd warning: coord_tern.Rd:36: missing link ‘geom_segment’ data_Feldspar html data_Fragments html data_SkyeLava html data_USDA html data_WhiteCells html dot-getFunctions html draw_key_tern html geom_Xisoprop html geom_Xline html Rd warning: geom_Xline.Rd:136: missing link ‘geom_hline’ Rd warning: geom_Xline.Rd:137: missing link ‘geom_vline’ geom_confidence_tern html Rd warning: geom_confidence_tern.Rd:107: missing link ‘ilr’ Rd warning: geom_confidence_tern.Rd:118: missing link ‘stat_contour’ geom_crosshair_tern html geom_density_tern html geom_errorbarX html geom_hex_tern html Rd warning: geom_hex_tern.Rd:110: missing link ‘aes_position’ Rd warning: geom_hex_tern.Rd:110: missing link ‘aes_colour_fill_alpha’ Rd warning: geom_hex_tern.Rd:110: missing link ‘aes_group_order’ Rd warning: geom_hex_tern.Rd:110: missing link ‘aes_linetype_size_shape’ geom_interpolate_tern html geom_label_viewport html geom_mask html geom_mean_ellipse html Rd warning: geom_mean_ellipse.Rd:97: missing link ‘compositions’ Rd warning: geom_mean_ellipse.Rd:106: missing link ‘stat_contour’ geom_point_swap html geom_polygon_closed html geom_smooth_tern html geom_text_viewport html geom_tri_tern html Rd warning: geom_tri_tern.Rd:97: missing link ‘aes_position’ Rd warning: geom_tri_tern.Rd:97: missing link ‘aes_colour_fill_alpha’ Rd warning: geom_tri_tern.Rd:97: missing link ‘aes_group_order’ Rd warning: geom_tri_tern.Rd:97: missing link ‘aes_linetype_size_shape’ ggplot html ggplot_build html Rd warning: ggplot_build.Rd:25: missing link ‘benchplot’ ggplot_gtable html Rd warning: ggplot_gtable.Rd:22: missing link ‘gtable’ Rd warning: ggplot_gtable.Rd:18: missing link ‘gtable’ ggsave html ggtern html ggtern_labels html Rd warning: ggtern_labels.Rd:45: missing link ‘xlab’ Rd warning: ggtern_labels.Rd:45: missing link ‘ylab’ Rd warning: ggtern_labels.Rd:49: missing link ‘xlab’ Rd warning: ggtern_labels.Rd:50: missing link ‘ylab’ Rd warning: ggtern_labels.Rd:89: missing link ‘latex2exp’ ggtern_labels_arrow_suffix html ggtern_package html Rd warning: ggtern_package.Rd:36: missing link ‘proto’ ggtern_themes html kde2d.weighted html Rd warning: kde2d.weighted.Rd:42: missing link ‘kde2d’ label_formatter html labels_tern html mahalanobis_distance html overloaded html position_jitter_tern html position_nudge_tern html predictdf2d html rgb2hex html scale_X_continuous html strip_unapproved html tern_limits html ternary_transformation html theme html theme_arrowlength html theme_bordersontop html theme_clockwise html theme_complete html theme_convenience_functions html theme_elements html Rd warning: theme_elements.Rd:22: missing link ‘element_rect’ theme_gridsontop html theme_latex html Rd warning: theme_latex.Rd:22: missing link ‘latex2exp’ Rd warning: theme_latex.Rd:23: missing link ‘TeX’ theme_legendposition html theme_mesh html theme_novar_tern html theme_rotate html theme_showarrows html theme_showgrid html Rd warning: theme_showgrid.Rd:48: missing link ‘element_line’ Rd warning: theme_showgrid.Rd:48: missing link ‘element_blank’ theme_showlabels html theme_showmask html theme_showprimary html theme_showtitles html theme_ticklength html theme_ticksoutside html theme_zoom_X html transform_position_tern html undocumented html zzz-depreciated html ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggtern)