* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘ggDNAvis’ ...
** this is package ‘ggDNAvis’ version ‘1.0.0’
** package ‘ggDNAvis’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘ggDNAvis’
finding HTML links ... done
bad_arg html
convert_MM_vector_to_locations html
convert_base_to_number html
convert_locations_to_MM_vector html
convert_modification_to_number_vector html
convert_sequence_to_numbers html
convert_sequences_to_matrix html
create_image_data html
debug_join_vector_num html
debug_join_vector_str html
example_many_sequences html
extract_and_sort_methylation html
extract_and_sort_sequences html
fastq_quality_scores html
format_time_diff html
ggDNAvis-package html
ggDNAvis_aliases html
ggDNAvis_shinyapp html
insert_at_indices html
merge_fastq_with_metadata html
merge_methylation_with_metadata html
monitor html
monitor_start html
rasterise_index_annotations html
rasterise_matrix html
rasterise_probabilities html
read_fastq html
read_modified_fastq html
resolve_alias html
resolve_alias_map html
reverse_complement html
reverse_locations_if_needed html
reverse_probabilities_if_needed html
reverse_quality_if_needed html
reverse_sequence_if_needed html
sequence_colour_palettes html
string_to_vector html
strip_leading_at html
vector_to_string html
visualise_many_sequences html
visualise_methylation html
visualise_methylation_colour_scale html
visualise_single_sequence html
write_fastq html
write_modified_fastq html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ggDNAvis)