- using R version 4.6.1 Patched (2026-09-08 r90508)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-16 (Debian 16.2.0-1) 16.2.0
GNU Fortran (Debian 16.2.0-1) 16.2.0
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
* current time: 2026-09-09 13:36:11 UTC
- checking for file ‘geozarr/DESCRIPTION’ ... OK
- this is package ‘geozarr’ version ‘0.1.0’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘geozarr’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [1s/1s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the package can be unloaded cleanly ... [0s/1s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/1s] OK
- checking whether the namespace can be unloaded cleanly ... [0s/1s] OK
- checking loading without being on the library search path ... [0s/1s] OK
- checking whether startup messages can be suppressed ... [0s/1s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [5s/7s] OK
- checking Rd files ... [1s/1s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking examples ... [1s/1s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [6s/7s] ERROR
Running ‘testthat.R’ [5s/6s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(geozarr)
Loading required package: zarr
>
> test_check("geozarr")
Saving _problems/test-api-30.R
Saving _problems/test-api-42.R
Saving _problems/test-api-56.R
Saving _problems/test-api-58.R
Saving _problems/test-api-110.R
Saving _problems/test-api-112.R
Saving _problems/test-api-132.R
Saving _problems/test-api-144.R
Saving _problems/test-api-158.R
Saving _problems/test-api-160.R
Saving _problems/test-api-212.R
Saving _problems/test-api-214.R
Saving _problems/test-api-240.R
Saving _problems/test-api-256.R
Saving _problems/test-api-258.R
Saving _problems/test-api-305.R
Saving _problems/test-api-307.R
[ FAIL 17 | WARN 0 | SKIP 0 | PASS 157 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-api.R:30:3'): spatial-memory ─────────────────────────────────
Expected `z[["/"]][]` to be identical to `arr_bare`.
Differences:
`dimnames(actual)` is a list
`dimnames(expected)` is absent
── Failure ('test-api.R:42:3'): spatial-memory ─────────────────────────────────
Expected `z[["/abc"]][]` to be identical to `arr_bare`.
Differences:
`dimnames(actual)` is a list
`dimnames(expected)` is absent
── Failure ('test-api.R:56:3'): spatial-memory ─────────────────────────────────
Expected `gza[]` to be identical to `arr_bare`.
Differences:
`dimnames(actual)` is a list
`dimnames(expected)` is absent
── Failure ('test-api.R:58:3'): spatial-memory ─────────────────────────────────
Expected `z[["/grp/abc"]][]` to be identical to `arr_bare`.
Differences:
`dimnames(actual)` is a list
`dimnames(expected)` is absent
── Failure ('test-api.R:110:3'): spatial-filesystem ────────────────────────────
Expected `gza[]` to be identical to `arr_bare`.
Differences:
`dimnames(actual)` is a list
`dimnames(expected)` is absent
── Failure ('test-api.R:112:3'): spatial-filesystem ────────────────────────────
Expected `z[["/grp/abc"]][]` to be identical to `arr_bare`.
Differences:
`dimnames(actual)` is a list
`dimnames(expected)` is absent
── Failure ('test-api.R:132:3'): cs-regular-memory ─────────────────────────────
Expected `z[["/"]][]` to be identical to `arr_bare`.
Differences:
`dimnames(actual)` is a list
`dimnames(expected)` is absent
── Failure ('test-api.R:144:3'): cs-regular-memory ─────────────────────────────
Expected `z[["/abc"]][]` to be identical to `arr_bare`.
Differences:
`dimnames(actual)` is a list
`dimnames(expected)` is absent
── Failure ('test-api.R:158:3'): cs-regular-memory ─────────────────────────────
Expected `gza[]` to be identical to `arr_bare`.
Differences:
`dimnames(actual)` is a list
`dimnames(expected)` is absent
── Failure ('test-api.R:160:3'): cs-regular-memory ─────────────────────────────
Expected `z[["/grp/abc"]][]` to be identical to `arr_bare`.
Differences:
`dimnames(actual)` is a list
`dimnames(expected)` is absent
── Failure ('test-api.R:212:3'): cs-regular-filesystem ─────────────────────────
Expected `gza[]` to be identical to `arr_bare`.
Differences:
`dimnames(actual)` is a list
`dimnames(expected)` is absent
── Failure ('test-api.R:214:3'): cs-regular-filesystem ─────────────────────────
Expected `z[["/grp/abc"]][]` to be identical to `arr_bare`.
Differences:
`dimnames(actual)` is a list
`dimnames(expected)` is absent
── Failure ('test-api.R:240:3'): cs-irregular-memory ───────────────────────────
Expected `z[["/abc"]][]` to be identical to `arr_bare`.
Differences:
`dimnames(actual)` is a list
`dimnames(expected)` is absent
── Failure ('test-api.R:256:3'): cs-irregular-memory ───────────────────────────
Expected `gza[]` to be identical to `arr_bare`.
Differences:
`dimnames(actual)` is a list
`dimnames(expected)` is absent
── Failure ('test-api.R:258:3'): cs-irregular-memory ───────────────────────────
Expected `z[["/grp/abc"]][]` to be identical to `arr_bare`.
Differences:
`dimnames(actual)` is a list
`dimnames(expected)` is absent
── Failure ('test-api.R:305:3'): cs-irregular-filesystem ───────────────────────
Expected `gza[]` to be identical to `arr_bare`.
Differences:
`dimnames(actual)` is a list
`dimnames(expected)` is absent
── Failure ('test-api.R:307:3'): cs-irregular-filesystem ───────────────────────
Expected `z[["/grp/abc"]][]` to be identical to `arr_bare`.
Differences:
`dimnames(actual)` is a list
`dimnames(expected)` is absent
[ FAIL 17 | WARN 0 | SKIP 0 | PASS 157 ]
Error:
! Test failures.
Execution halted
- checking PDF version of manual ... [6s/8s] OK
- checking HTML version of manual ... [5s/8s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 ERROR