* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘gMCP’ ...
** package ‘gMCP’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-25) 13.2.0’
make[1]: Entering directory '/tmp/Rtmp5YBbNT/R.INSTALL42c7c4e8027c3/gMCP/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c gMCP.c -o gMCP.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c gMCP_init.c -o gMCP_init.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c mcp.c -o mcp.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o gMCP.so gMCP.o gMCP_init.o mcp.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmp5YBbNT/R.INSTALL42c7c4e8027c3/gMCP/src'
make[1]: Entering directory '/tmp/Rtmp5YBbNT/R.INSTALL42c7c4e8027c3/gMCP/src'
make[1]: Leaving directory '/tmp/Rtmp5YBbNT/R.INSTALL42c7c4e8027c3/gMCP/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-gMCP/00new/gMCP/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘gMCP’
    finding HTML links ... done
    bdiagNA                                 html  
    bonferroni.test                         html  
    bonferroni.trimmed.simes.test           html  
    calcPower                               html  
    confint                                 html  
    corMatWizard                            html  
    doInterim                               html  
    entangled                               html  
    exampleGraphs                           html  
    extractPower                            html  
    gMCP-package                            html  
    gMCP                                    html  
    gMCP.extended                           html  
    gMCPReport                              html  
    gMCPResult                              html  
    gPADInterim                             html  
    generateBounds                          html  
    generatePvals                           html  
    generateTest                            html  
    generateWeights                         html  
    getJavaInfo                             html  
    graph2latex                             html  
    graphAnalysis                           html  
    graphGUI                                html  
    graphMCP                                html  
    graphTest                               html  
    hydroquinone                            html  
    joinGraphs                              html  
    matrix2graph                            html  
    parametric.test                         html  
    placeNodes                              html  
    plotSimCI                               html  
    rejectNode                              html  
    replaceVariables                        html  
    rqmvnorm                                html  
    sampSize                                html  
    sampSizeCore                            html  
    secondStageTest                         html  
    simes.on.subsets.test                   html  
    simes.test                              html  
    simvastatin                             html  
    subgraph                                html  
    substituteEps                           html  
    unitTestsGMCP                           html  
    weighted.test.functions                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* creating tarball
packaged installation of ‘gMCP’ as ‘gMCP_0.8-17_R_x86_64-pc-linux-gnu.tar.gz’
* DONE (gMCP)