* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘freesurfer’ ...
** this is package ‘freesurfer’ version ‘1.8.1’
** package ‘freesurfer’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘freesurfer’
    finding HTML links ... done
    aparcs_to_bg                            html  
    aparcstats2table                        html  
    aparcstats2table.help                   html  
    asegstats2table                         html  
    asegstats2table.help                    html  
    check_fs_result                         html  
    checkmnc-methods                        html  
    construct_subj_dir                      html  
    convert_surface                         html  
    freesurfer_read3                        html  
    freesurfer_read3_con                    html  
    freesurfer_read_curv                    html  
    freesurfer_read_surf                    html  
    freesurferdir                           html  
    fs_cmd                                  html  
    fs_help                                 html  
    fs_imgext                               html  
    fs_lut                                  html  
    fs_subj_dir                             html  
    fs_version                              html  
    get_fs                                  html  
    get_fs_output                           html  
    have_fs                                 html  
    mnc2nii                                 html  
    mnc2nii.help                            html  
    mri_convert                             html  
    mri_convert.help                        html  
    mri_deface                              html  
    mri_info                                html  
    mri_info.help                           html  
    mri_mask                                html  
    mri_mask.help                           html  
    mri_normalize                           html  
    mri_normalize.help                      html  
    mri_segment                             html  
    mri_segment.help                        html  
    mri_surf2surf                           html  
    mri_surf2surf.help                      html  
    mri_synthstrip                          html  
    mri_synthstrip.help                     html  
    mri_watershed                           html  
    mri_watershed.help                      html  
    mris_convert                            html  
    mris_convert.help                       html  
    mris_convert_annot                      html  
    mris_convert_curv                       html  
    mris_convert_normals                    html  
    mris_convert_vertex                     html  
    mris_euler_number                       html  
    mris_euler_number.help                  html  
    nii2mnc                                 html  
    nii2mnc.help                            html  
    nu_correct                              html  
    nu_correct.help                         html  
    read_annotation                         html  
    read_aseg_stats                         html  
    read_fs_label                           html  
    read_fs_table                           html  
    readmgz                                 html  
    readmnc                                 html  
    recon                                   html  
    recon_all                               html  
    recon_manual                            html  
    reconner                                html  
    run_check_fs_cmd                        html  
    set_fs_subj_dir                         html  
    surf_convert                            html  
    surface_to_obj                          html  
    surface_to_triangles                    html  
    trac_all                                html  
    trac_manual                             html  
    tracker                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (freesurfer)