* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘forestsearch’ ...
** this is package ‘forestsearch’ version ‘0.1.0’
** package ‘forestsearch’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘forestsearch’
    finding HTML links ... done
    CV_sgs                                  html  
    FS_labels                               html  
    SG_tab_estimates                        html  
    SGplot_estimates                        html  
    acm.disjctif                            html  
    add_id_column                           html  
    add_unprocessed_vars                    html  
    analyze_subgroup                        html  
    apply_spline_constraint                 html  
    assemble_results                        html  
    assign_subgroup_membership              html  
    bootstrap_results                       html  
    bootstrap_ystar                         html  
    build_classification_table              html  
    build_cox_formula                       html  
    build_estimation_table                  html  
    calc_cov                                html  
    calculate_counts                        html  
    calculate_event_counts                  html  
    calculate_hazard_ratios                 html  
    calculate_linear_predictors             html  
    calculate_max_combinations              html  
    calculate_potential_hr                  html  
    calculate_skewness                      html  
    calibrate_cens_adjust                   html  
    calibrate_k_inter                       html  
    check_censoring_dgm                     html  
    ci_est                                  html  
    compare_detection_curves                html  
    compare_multiple_survreg                html  
    compute_ahr                             html  
    compute_cde                             html  
    compute_detection_probability           html  
    compute_detection_probability_single    html  
    compute_dgm_cde                         html  
    compute_node_metrics                    html  
    compute_sg_hr                           html  
    compute_sg_hr_estimates                 html  
    compute_sg_summary                      html  
    count_boot_id                           html  
    cox_ahr_cde_analysis                    html  
    cox_cs_fit                              html  
    cox_summary                             html  
    cox_summary_batch                       html  
    cox_summary_vectorized                  html  
    create_bootstrap_caption                html  
    create_bootstrap_diagnostic_plots       html  
    create_dgm_for_mrct                     html  
    create_factor_summary_tables            html  
    create_forest_theme                     html  
    create_fs_subgroup_indicators           html  
    create_gbsg_dgm                         html  
    create_grf_config                       html  
    create_null_result                      html  
    create_reference_subgroup_columns       html  
    create_result_row                       html  
    create_sample_size_table                html  
    create_spline_variables                 html  
    create_subgroup_indicator               html  
    create_subgroup_summary_df              html  
    create_success_result                   html  
    create_summary_table                    html  
    create_summary_table_compact            html  
    create_summary_table_minimal            html  
    create_summary_table_presentation       html  
    create_summary_table_publication        html  
    create_timing_summary_table             html  
    cut_numeric                             html  
    cut_size                                html  
    cut_var                                 html  
    cv_compare_results                      html  
    cv_metrics_tables                       html  
    cv_summary_tables                       html  
    cv_summary_text                         html  
    default_fs_params                       html  
    default_grf_params                      html  
    default_grf_params_gen                  html  
    default_sim_params                      html  
    define_subgroups                        html  
    density_threshold_both                  html  
    density_threshold_integrand             html  
    detect_variable_types                   html  
    dummy_encode                            html  
    early_stop_decision                     html  
    evaluate_combination_with_status        html  
    evaluate_comparison                     html  
    evaluate_consistency_twostage           html  
    evaluate_cuts_once                      html  
    evaluate_subgroup_consistency           html  
    extract_all_tree_cuts                   html  
    extract_fs_estimates                    html  
    extract_fs_subgroup_definition          html  
    extract_grf_estimates                   html  
    extract_idx_flagredundancy              html  
    extract_selected_tree_cuts              html  
    extract_subgroup                        html  
    extract_tree_cuts                       html  
    figure_note                             html  
    filter_by_lassokeep                     html  
    filter_call_args                        html  
    find_covariate_any_match                html  
    find_k_inter_for_target_hr              html  
    find_leaf_split                         html  
    find_quantile_for_proportion            html  
    find_required_sample_size               html  
    fit_aft_model                           html  
    fit_aft_model_spline                    html  
    fit_aft_model_standard                  html  
    fit_causal_forest                       html  
    fit_cox_for_subgroup                    html  
    fit_cox_models                          html  
    fit_policy_trees                        html  
    forestsearch-package                    html  
    forestsearch                            html  
    forestsearch_Kfold                      html  
    forestsearch_KfoldOut                   html  
    forestsearch_bootstrap_dofuture         html  
    forestsearch_tenfold                    html  
    format_CI                               html  
    format_bootstrap_diagnostics_table      html  
    format_bootstrap_table                  html  
    format_bootstrap_timing_table           html  
    format_continuous_definition            html  
    format_fs_details                       html  
    format_oc_results                       html  
    format_results                          html  
    format_search_results                   html  
    format_subgroup_summary_tables          html  
    generate_aft_dgm_flex                   html  
    generate_bootstrap_synthetic            html  
    generate_bootstrap_with_noise           html  
    generate_combination_indices            html  
    generate_complement_expression          html  
    generate_detection_curve                html  
    generate_gbsg_bootstrap_general         html  
    generate_readable_sg_labels             html  
    generate_super_population               html  
    get_Cox_sg                              html  
    get_FSdata                              html  
    get_best_survreg                        html  
    get_bootstrap_exports                   html  
    get_combinations_info                   html  
    get_conf_force                          html  
    get_covs_in                             html  
    get_cut_name                            html  
    get_dfRes                               html  
    get_dfpred                              html  
    get_dgm_hr                              html  
    get_dgm_with_output                     html  
    get_param                               html  
    get_split_hr_fast                       html  
    get_subgroup_membership                 html  
    get_targetEst                           html  
    gg_forest                               html  
    grf.subg.eval                           html  
    grf.subg.harm.survival                  html  
    has_positive_variance                   html  
    hrCI_format                             html  
    interpret_estimation_table              html  
    is.continuous                           html  
    is_flag_continuous                      html  
    is_flag_drop                            html  
    km_summary                              html  
    lasso_selection                         html  
    meets_event_criteria                    html  
    meets_prevalence_threshold              html  
    mrct_region_sims                        html  
    n_pcnt                                  html  
    parse_sg_harm_to_expression             html  
    plot.forestsearch                       html  
    plot.fs_forestplot                      html  
    plot.fs_sg_plot                         html  
    plot_detection_curve                    html  
    plot_km_band_forestsearch               html  
    plot_sg_distribution                    html  
    plot_sg_forest                          html  
    plot_sg_km                              html  
    plot_sg_results                         html  
    plot_sg_summary_panel                   html  
    plot_sg_weighted_km                     html  
    plot_spline_treatment_effect            html  
    plot_subgroup                           html  
    plot_subgroup_effects                   html  
    plot_subgroup_results_forestplot        html  
    prepare_censoring_model                 html  
    prepare_search_data                     html  
    prepare_subgroup_data                   html  
    prepare_working_dataset                 html  
    print.cox_ahr_cde                       html  
    print.forestsearch                      html  
    print.fs_forest_theme                   html  
    print.fs_forestplot                     html  
    print.fs_kfold                          html  
    print.fs_sg_plot                        html  
    print.fs_tenfold                        html  
    print.fs_weighted_km                    html  
    print.gbsg_dgm                          html  
    print.multi_survreg_comparison          html  
    print_cv_params                         html  
    print_grf_details                       html  
    process_conf_force_expr                 html  
    process_continuous_subgroup             html  
    process_continuous_vars                 html  
    process_cutpoint                        html  
    process_factor_subgroup                 html  
    process_factor_vars                     html  
    qhigh                                   html  
    qlow                                    html  
    quick_km_band_plot                      html  
    remove_near_duplicate_subgroups         html  
    remove_redundant_subgroups              html  
    render_forestplot                       html  
    render_reference_table                  html  
    resolve_bootstrap_parallel_args         html  
    resolve_cv_parallel_args                html  
    rmst_calculation                        html  
    run_forestsearch_analysis               html  
    run_grf_analysis                        html  
    run_simulation_analysis                 html  
    run_single_consistency_split            html  
    safe_eval_expr                          html  
    safe_subset                             html  
    save_forestplot                         html  
    select_best_subgroup                    html  
    sens_text                               html  
    sensitivity_analysis_k_inter            html  
    setup_gbsg_dgm                          html  
    setup_parallel_SGcons                   html  
    sg_consistency_out                      html  
    sg_tables                               html  
    simulate_from_dgm                       html  
    simulate_from_gbsg_dgm                  html  
    sort_subgroups                          html  
    sort_subgroups_preview                  html  
    subgroup.consistency                    html  
    subgroup.search                         html  
    summarize_bootstrap_events              html  
    summarize_bootstrap_results             html  
    summarize_bootstrap_subgroups           html  
    summarize_factor_presence_robust        html  
    summarize_simulation_results            html  
    summarize_single_analysis               html  
    summary.cox_ahr_cde                     html  
    summary.forestsearch                    html  
    summaryout_mrct                         html  
    validate_grf_data                       html  
    validate_inputs                         html  
    validate_k_inter_effect                 html  
    validate_mrct_data                      html  
    validate_spline_spec                    html  
    wilson_ci                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (forestsearch)