* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘fmrihrf’ ...
** this is package ‘fmrihrf’ version ‘0.1.0’
** package ‘fmrihrf’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.3.0-7) 14.3.0’
using C++17
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpNYNa14/R.INSTALL2f6f0e7ee75add/fmrihrf/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_DONT_PRINT_FAST_MATH_WARNING -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_DONT_PRINT_FAST_MATH_WARNING -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -c neural_input.cpp -o neural_input.o
neural_input.cpp:1:9: warning: "ARMA_DONT_PRINT_FAST_MATH_WARNING" redefined
1 | #define ARMA_DONT_PRINT_FAST_MATH_WARNING
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<command-line>: note: this is the location of the previous definition
neural_input.cpp: In function ‘arma::uword nextPow2(arma::uword)’:
neural_input.cpp:221:11: warning: right shift count >= width of type [-Wshift-count-overflow]
221 | v |= v>>32;
| ~^~~~
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o fmrihrf.so RcppExports.o neural_input.o -fopenmp -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpNYNa14/R.INSTALL2f6f0e7ee75add/fmrihrf/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpNYNa14/R.INSTALL2f6f0e7ee75add/fmrihrf/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpNYNa14/R.INSTALL2f6f0e7ee75add/fmrihrf/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-fmrihrf/00new/fmrihrf/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘fmrihrf’
finding HTML links ... done
HRF-class html
HRF_objects html
Reg html
acquisition_onsets html
amplitudes html
as_hrf html
bind_basis html
block_hrf html
blockids html
blocklens html
deriv.HRF html
deriv html
deriv.SPMG1_HRF html
deriv.SPMG2_HRF html
deriv.SPMG3_HRF html
durations html
empirical_hrf html
evaluate.HRF html
evaluate html
fmrihrf-package html
gen_hrf html
gen_hrf_blocked html
gen_hrf_lagged html
getHRF html
global_onsets html
hrf_basis_lwu html
hrf_bspline html
hrf_bspline_generator html
hrf_daguerre_generator html
hrf_fir_generator html
hrf_fourier html
hrf_fourier_generator html
hrf_from_coefficients html
hrf_gamma html
hrf_gaussian html
hrf_half_cosine html
hrf_inv_logit html
hrf_library html
hrf_lwu html
hrf_mexhat html
hrf_set html
hrf_sine html
hrf_spmg1 html
hrf_time html
hrf_toeplitz html
lag_hrf html
list_available_hrfs html
make_hrf html
nbasis html
neural_input html
normalise_hrf html
onsets html
penalty_matrix html
plot.HRF html
print html
reconstruction_matrix html
regressor html
regressor_design html
regressor_set html
samples html
sampling_frame html
shift html
single_trial_regressor html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (fmrihrf)