* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘flownet’ ...
** this is package ‘flownet’ version ‘0.3.0’
** package ‘flownet’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-15 (Debian 15.2.0-17) 15.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpA7exU6/R.INSTALL26d72f1332d7bc/flownet/src'
gcc-15 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c critical_link_analysis.c -o critical_link_analysis.o
gcc-15 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c init.c -o init.o
gcc-15 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c path_sized_logit.c -o path_sized_logit.o
gcc-15 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c utils.c -o utils.o
In file included from /usr/include/string.h:548,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/include/R_ext/RS.h:34,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/include/R.h:78,
                 from utils.c:1:
In function ‘memset’,
    inlined from ‘contract_linear_nodes’ at utils.c:340:3:
/usr/include/x86_64-linux-gnu/bits/string_fortified.h:59:10: warning: ‘__builtin_memset’ specified size between 9223372036854775808 and 18446744073709551615 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=]
   59 |   return __builtin___memset_chk (__dest, __ch, __len,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   60 |                                  __glibc_objsize0 (__dest));
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~
gcc-15 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o flownet.so critical_link_analysis.o init.o path_sized_logit.o utils.o -fopenmp -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpA7exU6/R.INSTALL26d72f1332d7bc/flownet/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpA7exU6/R.INSTALL26d72f1332d7bc/flownet/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpA7exU6/R.INSTALL26d72f1332d7bc/flownet/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-flownet/00new/flownet/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘flownet’
    finding HTML links ... done
    africa_cities_ports                     html  
    africa_network                          html  
    africa_segments                         html  
    africa_trade                            html  
    consolidate_graph                       html  
    create_undirected_graph                 html  
    critical_link_analysis                  html  
    distances_from_graph                    html  
    flownet-package                         html  
    linestrings_from_graph                  html  
    linestrings_to_graph                    html  
    melt_od_matrix                          html  
    nodes_from_graph                        html  
    normalize_graph                         html  
    run_assignment                          html  
    simplify_network                        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (flownet)