* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘flexsdm’ ...
** this is package ‘flexsdm’ version ‘1.4.2’
** package ‘flexsdm’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-16 (Debian 16.2.0-3) 16.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpXmJvtY/R.INSTALL1aec8a385b46f7/flexsdm/src'
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c euc_dist.cpp -o euc_dist.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c euc_dist_min.cpp -o euc_dist_min.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c mah_dist.cpp -o mah_dist.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c mah_dist_min.cpp -o mah_dist_min.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c min_gower.cpp -o min_gower.o
g++-16 -std=gnu++20 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o flexsdm.so RcppExports.o euc_dist.o euc_dist_min.o mah_dist.o mah_dist_min.o min_gower.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpXmJvtY/R.INSTALL1aec8a385b46f7/flexsdm/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpXmJvtY/R.INSTALL1aec8a385b46f7/flexsdm/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpXmJvtY/R.INSTALL1aec8a385b46f7/flexsdm/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-flexsdm/00new/flexsdm/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘flexsdm’
finding HTML links ... done
abies html
backg html
calib_area html
correct_colinvar html
data_bpdp html
data_pdp html
env_outliers html
esm_gam html
esm_gau html
esm_gbm html
esm_glm html
esm_max html
esm_net html
esm_svm html
extra_eval html
extra_truncate html
fit_dom html
fit_ensemble html
fit_gam html
fit_gau html
fit_gbm html
fit_glm html
fit_max html
fit_net html
fit_raf html
fit_svm html
get_absences html
get_block html
hespero html
homogenize_na html
interp html
map_env_dist html
msdm_posteriori html
msdm_priori html
occ_reproj html
occfilt_env html
occfilt_geo html
occfilt_select html
p_bpdp html
p_extra html
p_pdp html
palms html
part_random html
part_sband html
part_sblock html
part_senv html
plot_res html
sample_background html
sample_pseudoabs html
sdm_directory html
sdm_eval html
sdm_extract html
sdm_predict html
sdm_summarize html
sdm_uncertainty html
sdm_varimp html
spp html
tune_gbm html
tune_max html
tune_net html
tune_raf html
tune_svm html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (flexsdm)