* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘fingerPro’ ...
** this is package ‘fingerPro’ version ‘2.0’
** package ‘fingerPro’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.3.0-5) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpiDpjZe/R.INSTALL24eea971bdebad/fingerPro/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c fingerprinting.cpp -o fingerprinting.o
fingerprinting.cpp: In function ‘Rcpp::DataFrame unmix_c_lvp(SEXP, SEXP, int, int, int, int)’:
fingerprinting.cpp:148:33: warning: unused variable ‘avg’ [-Wunused-variable]
148 | double gof1, gof2, sum, avg, des, *max, *min, *try1, *try2;
| ^~~
fingerprinting.cpp:148:38: warning: unused variable ‘des’ [-Wunused-variable]
148 | double gof1, gof2, sum, avg, des, *max, *min, *try1, *try2;
| ^~~
fingerprinting.cpp:238:18: warning: variable ‘tried’ set but not used [-Wunused-but-set-variable]
238 | type_try tried, best;
| ^~~~~
fingerprinting.cpp: In function ‘Rcpp::DataFrame unmix_c(SEXP, SEXP, int, int, int, int)’:
fingerprinting.cpp:499:33: warning: unused variable ‘avg’ [-Wunused-variable]
499 | double gof1, gof2, sum, avg, des, *max, *min, *try1, *try2;
| ^~~
fingerprinting.cpp:499:38: warning: unused variable ‘des’ [-Wunused-variable]
499 | double gof1, gof2, sum, avg, des, *max, *min, *try1, *try2;
| ^~~
fingerprinting.cpp:589:18: warning: variable ‘tried’ set but not used [-Wunused-but-set-variable]
589 | type_try tried, best;
| ^~~~~
fingerprinting.cpp: In function ‘Rcpp::DataFrame least_squares_c(SEXP, SEXP, int, int)’:
fingerprinting.cpp:817:16: warning: unused variable ‘gof1’ [-Wunused-variable]
817 | double gof1, gof2, sum, avg, des, *max, *min, *try1, *try2;
| ^~~~
fingerprinting.cpp:817:22: warning: unused variable ‘gof2’ [-Wunused-variable]
817 | double gof1, gof2, sum, avg, des, *max, *min, *try1, *try2;
| ^~~~
fingerprinting.cpp:817:28: warning: unused variable ‘sum’ [-Wunused-variable]
817 | double gof1, gof2, sum, avg, des, *max, *min, *try1, *try2;
| ^~~
fingerprinting.cpp:817:33: warning: unused variable ‘avg’ [-Wunused-variable]
817 | double gof1, gof2, sum, avg, des, *max, *min, *try1, *try2;
| ^~~
fingerprinting.cpp:817:38: warning: unused variable ‘des’ [-Wunused-variable]
817 | double gof1, gof2, sum, avg, des, *max, *min, *try1, *try2;
| ^~~
fingerprinting.cpp:817:56: warning: variable ‘try1’ set but not used [-Wunused-but-set-variable]
817 | double gof1, gof2, sum, avg, des, *max, *min, *try1, *try2;
| ^~~~
fingerprinting.cpp:817:63: warning: variable ‘try2’ set but not used [-Wunused-but-set-variable]
817 | double gof1, gof2, sum, avg, des, *max, *min, *try1, *try2;
| ^~~~
fingerprinting.cpp:821:16: warning: unused variable ‘min0’ [-Wunused-variable]
821 | double min0, max0;
| ^~~~
fingerprinting.cpp:821:22: warning: unused variable ‘max0’ [-Wunused-variable]
821 | double min0, max0;
| ^~~~
fingerprinting.cpp:827:21: warning: unused variable ‘w1’ [-Wunused-variable]
827 | double det, w1, w2, w3, w4;
| ^~
fingerprinting.cpp:827:25: warning: unused variable ‘w2’ [-Wunused-variable]
827 | double det, w1, w2, w3, w4;
| ^~
fingerprinting.cpp:827:29: warning: unused variable ‘w3’ [-Wunused-variable]
827 | double det, w1, w2, w3, w4;
| ^~
fingerprinting.cpp:827:33: warning: unused variable ‘w4’ [-Wunused-variable]
827 | double det, w1, w2, w3, w4;
| ^~
fingerprinting.cpp:834:28: warning: unused variable ‘v4’ [-Wunused-variable]
834 | double v1, v2, v3, v4;
| ^~
fingerprinting.cpp:936:18: warning: variable ‘tried’ set but not used [-Wunused-but-set-variable]
936 | type_try tried, best;
| ^~~~~
fingerprinting.cpp: In function ‘Rcpp::DataFrame triangles_random_c(SEXP, SEXP, int, int, int)’:
fingerprinting.cpp:1226:16: warning: unused variable ‘gof1’ [-Wunused-variable]
1226 | double gof1, gof2, sum, avg, des, *max, *min, *try1, *try2;
| ^~~~
fingerprinting.cpp:1226:22: warning: unused variable ‘gof2’ [-Wunused-variable]
1226 | double gof1, gof2, sum, avg, des, *max, *min, *try1, *try2;
| ^~~~
fingerprinting.cpp:1226:28: warning: unused variable ‘sum’ [-Wunused-variable]
1226 | double gof1, gof2, sum, avg, des, *max, *min, *try1, *try2;
| ^~~
fingerprinting.cpp:1226:33: warning: unused variable ‘avg’ [-Wunused-variable]
1226 | double gof1, gof2, sum, avg, des, *max, *min, *try1, *try2;
| ^~~
fingerprinting.cpp:1226:38: warning: unused variable ‘des’ [-Wunused-variable]
1226 | double gof1, gof2, sum, avg, des, *max, *min, *try1, *try2;
| ^~~
fingerprinting.cpp:1226:56: warning: variable ‘try1’ set but not used [-Wunused-but-set-variable]
1226 | double gof1, gof2, sum, avg, des, *max, *min, *try1, *try2;
| ^~~~
fingerprinting.cpp:1226:63: warning: variable ‘try2’ set but not used [-Wunused-but-set-variable]
1226 | double gof1, gof2, sum, avg, des, *max, *min, *try1, *try2;
| ^~~~
fingerprinting.cpp:1230:16: warning: unused variable ‘min0’ [-Wunused-variable]
1230 | double min0, max0;
| ^~~~
fingerprinting.cpp:1230:22: warning: unused variable ‘max0’ [-Wunused-variable]
1230 | double min0, max0;
| ^~~~
fingerprinting.cpp:1335:18: warning: variable ‘tried’ set but not used [-Wunused-but-set-variable]
1335 | type_try tried, best;
| ^~~~~
fingerprinting.cpp: In function ‘Rcpp::DataFrame triangles_virtual_c(SEXP, SEXP, int, int, int)’:
fingerprinting.cpp:1620:16: warning: unused variable ‘gof1’ [-Wunused-variable]
1620 | double gof1, gof2, sum, avg, des, *max, *min, *try1, *try2;
| ^~~~
fingerprinting.cpp:1620:22: warning: unused variable ‘gof2’ [-Wunused-variable]
1620 | double gof1, gof2, sum, avg, des, *max, *min, *try1, *try2;
| ^~~~
fingerprinting.cpp:1620:28: warning: unused variable ‘sum’ [-Wunused-variable]
1620 | double gof1, gof2, sum, avg, des, *max, *min, *try1, *try2;
| ^~~
fingerprinting.cpp:1620:33: warning: unused variable ‘avg’ [-Wunused-variable]
1620 | double gof1, gof2, sum, avg, des, *max, *min, *try1, *try2;
| ^~~
fingerprinting.cpp:1620:38: warning: unused variable ‘des’ [-Wunused-variable]
1620 | double gof1, gof2, sum, avg, des, *max, *min, *try1, *try2;
| ^~~
fingerprinting.cpp:1620:56: warning: variable ‘try1’ set but not used [-Wunused-but-set-variable]
1620 | double gof1, gof2, sum, avg, des, *max, *min, *try1, *try2;
| ^~~~
fingerprinting.cpp:1620:63: warning: variable ‘try2’ set but not used [-Wunused-but-set-variable]
1620 | double gof1, gof2, sum, avg, des, *max, *min, *try1, *try2;
| ^~~~
fingerprinting.cpp:1730:18: warning: variable ‘tried’ set but not used [-Wunused-but-set-variable]
1730 | type_try tried, best;
| ^~~~~
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o fingerPro.so RcppExports.o fingerprinting.o -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpiDpjZe/R.INSTALL24eea971bdebad/fingerPro/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpiDpjZe/R.INSTALL24eea971bdebad/fingerPro/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpiDpjZe/R.INSTALL24eea971bdebad/fingerPro/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-fingerPro/00new/fingerPro/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘fingerPro’
finding HTML links ... done
CB_method html
CI html
CR html
CTS_error html
CTS_seeds html
DFA_test html
KW_test html
LDA_plot html
PCA_plot html
box_plot html
check_database html
correlation_plot html
fingerPro html
ggbiplot html
individual_tracer_analysis html
inputMixture html
inputSource html
plot_results html
range_test html
raw_dataset html
select_tracers html
ternary_diagram html
unmix html
virtual_mixture html
write_results html
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (fingerPro)