* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘fcros’ ...
** this is package ‘fcros’ version ‘1.6.1’
** package ‘fcros’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (Debian 14.3.0-8) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpRTRKsp/R.INSTALL441d5184d049c/fcros/src'
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c fcros.c -o fcros.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c init.c -o init.o
gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o fcros.so fcros.o init.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpRTRKsp/R.INSTALL441d5184d049c/fcros/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpRTRKsp/R.INSTALL441d5184d049c/fcros/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpRTRKsp/R.INSTALL441d5184d049c/fcros/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-fcros/00new/fcros/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘fcros’
    finding HTML links ... done
    bott                                    html  
    calcSRmat                               html  
    calcSRmatMod                            html  
    cghData                                 html  
    cghInfo                                 html  
    chrMerge                                html  
    chrPlot                                 html  
    chrPlot2                                html  
    chrSegment                              html  
    dataSummary                             html  
    fc2Calc                                 html  
    fcros-package                           html  
    fcros                                   html  
    fcros2                                  html  
    fcrosFCmat                              html  
    fcrosMod                                html  
    fcrosRead                               html  
    fcrosTopN                               html  
    fcrosTtest                              html  
    fcrosWrite                              html  
    fdata                                   html  
    fvalTopN                                html  
    fvalVolcanoPlot                         html  
    histoPlot                               html  
    moyStdCalc                              html  
    pfco                                    html  
    pfcoMod                                 html  
    pvalTopN                                html  
    pvalVolcanoPlot                         html  
    rankReads                               html  
    rmatCalc                                html  
    rmatTrim                                html  
    scoreThr                                html  
    tcnReads                                html  
    tprobaCalc                              html  
    varBeta                                 html  
    voomReads                               html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (fcros)